miRBase: integrating microRNA annotation and deep-sequencing data.
[No authors listed]
摘要
miRBase is the primary online repository for all microRNA sequences and annotation. The current release (miRBase 16) contains over 15,000 microRNA gene loci in over 140 species, and over 17,000 distinct mature microRNA sequences. Deep-sequencing technologies have delivered a sharp rise in the rate of novel microRNA discovery. We have mapped reads from short RNA deep-sequencing experiments to microRNAs in miRBase and developed web interfaces to view these mappings. The user can view all read data associated with a given microRNA annotation, filter reads by experiment and count, and search for microRNAs by tissue- and stage-specific expression. These data can be used as a proxy for relative expression levels of microRNA sequences, provide detailed evidence for microRNA annotations and alternative isoforms of mature microRNAs, and allow us to revisit previous annotations. miRBase is available online at: http://www.mirbase.org/.
KEYWORDS: {{ getKeywords(articleDetailText.words) }}
基因功能
- {{$index+1}}.{{ gene }}
基因
F630028O10Rik, Mirg, Mir22hg, Mir741, Mir743, Mir742, Mir181d, Mir290a, Mir292, Mir294, Mir295, Mir293, Mir291a, Mir18b, Mir193b, Mir208b, Mir344-2, Mir467d, Mir574, Mir598, Mir873a, Mir876, Mir877, Mir881, Mir883a, Mir653, Mir875, Mir92b, Mir291b, Mir504, Mir871, Mir878, Mir880, Mir190b, Mir511, Mir582, Mir874, Mir879, Mir883b, Mir743b, Mir669k, Mir669i, Mir1188, Mir1193, Mir1199, Mir1892, Mir1929, Mir1931, Mir1932, Mir1938, Mir1943, Mir1947, Mir1948, Mir1949, Mir1951, Mir1953, Mir1956, Mir1960, Mir1963, Mir1964, Mir1966, Mir1968, Mir1839, Mir664, Mir1224, Mir1197, Mir1933, Mir1955, Mir1969, Mir1982, Mir1b, Mir669g, Mir1187, Mir1930, Mir1936, Mir1962, Mir1967, Mir1981, Mir669h, Mir1945, Mir1934, Mir3475, Mir3099, Mir3072, Mir3473a, Mir3474, Mir1264, Mir1249, Mir1298, Mir3058, Mir3106, Mir3057, Mir3060, Mir3061, Mir3064, Mir3066, Mir3069, Mir3070a, Mir3071, Mir3076, Mir3077, Mir3081, Mir3082, Mir3086, Mir3088, Mir3089, Mir3094, Mir3095, Mir3100, Mir3101, Mir344c, Mir344g, Mir3104, Mir3107, Mir3108, Mir1247, Mir3059, Mir1251, Mir3065, Mir3070b, Mir3092, Mir344f, Mir3074-2, Mir1912, Mir1843a, Mir344d-2, Mir3067, Mir3075, Mir3083, Mir3093, Mir344e, Mir344d-3, Mir344d-1, Mir3062, Mir3068, Mir3073a, Mir3085, Mir3087, Mir3091, Mir3097, Mir344b, Mir3103, Mir3109, Mir378b, Mir101c, Mir3969, Mir5103, Mir5104, Mir3572, Mir5126, Mir5128, Mir5129, Mir5130, Mir5132, Mir5133, Mir5134, Mir5135, Mir5107, Mir5113, Mir5106, Mir1843b, Mir5100, Mir5121, Mir3544, Mir5615-1, Mir5615-2, Mir1231, Mir5616, Mir5617, Mir5619, Mir5620, Mir5621, Mir5623, Mir3073b, Mir5624, Mir5626, Mir5627, Mir344i, Mir5709, Mir5710, Chpf2, Mir6418, Mir6539, Mir7210, Gm24148, Mir6540, Mir6399, Gm23363, Gm38670, Gm22650, Cstf2, Epc1, Igf2bp1, Fancc, Hipk3, Meg3, Scd2, Slc9a1, Mmgt1, Mir124a-1hg, Mir9-1, Mir16-1, Mir18, Mir1a-1, Mir20a, Mir101a, Mir10b, Mir126a, Mir127, Mir128-1, Mir130a, Mir132, Mir133a-1, Mir134, Mir135a-1, Mir136, Mir137, Mir138-1, Mir139, Mir140, Mir141, Mir142, Mir143, Mir144, Mir145a, Mir146, Mir148a, Mir149, Mir150, Mir152, Mir153, Mir154, Mir155, Mir15a, Mir15b, Mir181a-2, Mir182, Mir183, Mir184, Mir185, Mir186, Mir187, Mir188, Mir190a, Mir191, Mir192, Mir193a, Mir194-1, Mir195a, Mir196a-1, Mir199a-1, Mir19b-2, Mir201, Mir202, Mir203, Mir204, Mir205, Mir206, Mir208a, Mir210, Mir211, Mir212, Mir214, Mir215, Mir216a, Mir217, Mir23a, Mir26a-1, Mir26b, Mir27a, Mir29a, Mir29b-1, Mir29c, Mir30a, Mir30b, Mir30c-1, Mir30d, Mir99a, Mir122, Mir125b-1, Mir129-1, Mir199b, Mir200a, Mir200b, Mirlet7a-1, Mirlet7b, Mirlet7c-1, Mirlet7d, Mirlet7g, Mirlet7i, Mirlet7f-1, Mirlet7f-2, AA467197, Dalrd3, 2010111I01Rik, Mir128-2, Mir130b, Mir133b, Mir135b, Mir181c, Mir196b, Mir199a-2, Mir218-1, Mir219a-1, Mir103-1, Mir103-2, Mir107, Mir221, Mir222, Mir106a, Mir298, Mir300, Mir301, Mir302c, Mir30e, Mir32, Mir320, Mir323, Mir326, Mir328, Mir329, Mir337, Mir338, Mir340, Mir346, Mir34a, Mir34b, Mir362, Mir363, Mir365-2, Mir370, Mir376a, Mir376c, Mir377, Mir379, Mir380, Mir383, Mir384, Mir409, Mir429, Mir431, Mir434, Mir449a, Mir450-1, Mir451a, Mir468, Mir470, Mir483, Mir485, Mir486, Mir489, Mir494, Mir540, Mir543, Mir7b, Mir7-2, Mir93, Mir96, Mir463, Mir465, Mir181b-1, Mir19a, Mir100, Mir10a, Mir224, Mir31, Mir324, Mir33, Mir339, Mir365-1, Mir375, Mir542, Mir7-1, Mir181b-2, Mir219a-2, Mir17, Mir296, Mir331, Mir367, Mir382, Mir412, Mir448, Mir484, Mir539, Mir547, Mir452, Mir302a, Mir350, Mir20b, Mir218-2, Mir106b, Mir25, Mir299a, Mir302d, Mir335, Mir344, Mir34c, Mir369, Mir376b, Mir381, Mir411, Mir433, Mir450-2, Mir471, Mir487b, Mir541, Mir92-2, Mir200c, Mir345, Mir98, Mir302b, Mir16-2, Mir124a-2, Mir124a-3, Mir125b-2, Mir129-2, Mir133a-2, Mir135a-2, Mir138-2, Mir194-2, Mir196a-2, Mir1a-2, Mir24-2, Mir26a-2, Mir29b-2, Mir30c-2, Mirlet7a-2, Mirlet7c-2, Mir9-2, Mir9-3, Mir500, Mir101b, Mir330, Mir148b, C430049B03Rik, Mir674, Mir181a-1, Mir488, Mir467b, Mir670, Mir455, Mir698, Mir703, Mir592, Mir709, Mir499, Mir701, Mir490, Mir675, Mir491, Mir702, Mir700, Mir467a-1, Mir692-2, Mir704, Mir216b, Mir449c, Mir677, Mir423, Mir666, Mir495, Mir668, Mir496a, Mir19b-1, Mir692-1, Mir450b, Mir676, Mir672, Mir497, Mir679, Mir690, Mir532, Mir505, Mir374b, Mir673, Mir92-1, Mir146b, Mir667, Mir693, Mir665, Mir615, Mir694, Mir501, Spaca6, Vmp1, Mir301b, Mir744, Mir758, Mir551b, Mir802, Mir760, Mir764, Cacng8, Dgcr8, MIR167b, LOC104648595, MIR6022, MIR6023, MIR6024, MIR482B, MIR482A, MIR482E, MIR6026, MIR6027, MIR482D, MIR482C, MIR6025, Mir1, Mir200, Mir9, Mir29a, Mir31, Mir34, Mir92a, Mir92c, Mir96, Mir153, Mir182, Mir184, Mir278, Mir2012, Mir2013, Mir2002, Mir2004, Mir2006, Mir2011, Mir7, Mir71, Mir133, Mir2005, Mirlet7, Mir10, Mir92b, Mir125, Mir252a, Mir2003, Mir4847, MIR2954, MIR222B, MIR6516, MIR7461, MIR204-1, MIR196B, MIR141, MIR125B-1, MIR128A, MIR145, MIR153-1, MIR190A, MIR21, MIR24-1, MIR29A, MIR30A, MIR32, MIR99A, MIR101-1, MIR34A, MIR181A-2, MIR181C, MIR218-2, MIR221, MIR194-1, MIR215, MIR23A, MIR106B, MIR93, MIR183, MIR19B-2, MIR1224, MIR1-1, MIRLET7A-2, MIRLET7C, MIRLET7D, MIRLET7F-1, MIRLET7F-2, MIR7-1, MIR9-1, MIR10B, MIR23B, MIR26A-2, MIR29B-1, MIR29C, MIR30C-1, MIR30D, MIR30E, MIR34C, MIR101-2, MIR122A, MIR124A-2, MIR126, MIR129-1, MIR130B, MIR135A-1, MIR135B, MIR138, MIR140, MIR142, MIR146A, MIR148A, MIR181B-2, MIR181D, MIR186, MIR191, MIR196B, MIR197, MIR199A-2, MIR204, MIR206, MIR301A, MIR320A, MIR330, MIR337, MIR338, MIR339, MIR361, MIR374A, MIR374B, MIR379, MIR409, MIR423, MIR432, MIR451, MIR454, MIR485, MIR488, MIR532, MIR598, MIR654, MIR660, MIR876, MIR889, MIR15B, MIR98, MIR181B-1, MIR510, MIRLET7B, MIRLET7G, MIR9-2, MIR29B-2, MIR99B, MIR125A, MIR137, MIR144, MIR200A, MIR335, MIR381, MIR411, MIR452, MIR491, MIR497, MIR874, MIR129-2, MIR30B, MIR26A-1, MIR182, MIR25, MIRLET7A-3, MIRLET7I, MIR10A, MIR149, MIR185, MIR195, MIR299, MIR369, MIR376A-1, MIR383, MIR455, MIR107, MIR148B, MIR130A, MIR125B-2, MIR31, MIR100, MIR219-1, MIR181A-1, MIR24-2, MIRLET7A-1, MIRLET7E, MIR7-2, MIR16-2, MIR26B, MIR30C-2, MIR92A-2, MIR103-2, MIR128B, MIR134, MIR136, MIR143, MIR152, MIR192, MIR196A-2, MIR222, MIR301B, MIR323A, MIR331, MIR363, MIR377, MIR382, MIR429, MIR433, MIR484, MIR487B, MIR494, MIR628, MIR135A-2, MIR196A-1, MIR27A, MIR514A, MIR133C, MIR194-2, MIR218-1, MIR425, MIR486, MIR103-1, MIR27B, MIR139, MIR340, MIR4446, MIR873, MIR1185-1, MIR1262, MIR4803, MIR6505, MIR7178, MIR6529, MIR891B, MIR7196, MIR378D, MIR769, MIR127, TLCD2, MIR450B, MIR541, MIR876, MIR147B, MIR744, MIR877, MIR665, MIR873, MIR374B, MIR301B, MIR216B, MIR934, MIR935, MIR940, MIR941-1, MIR941-4, MIR942, MIR885, MIR543, MIR208B, MIR509-3, MIR937, MIR941-2, MIR944, MIR874, MIR889, MIR190B, MIR760, MIR933, MIR939, MIR941-3, MIR365A, MIR365B, MIR1224, MIR1284, MIR1468, MIR320B1, MIR1286, MIR1276, MIR1275, MIR1287, MIR320C1, MIR1292, MIR1537, MIR1248, MIR1912, MIR1247, MIR1296, MIR1185-1, MIR1278, MIR320D2, MIR1258, MIR1307, MIR1295A, MIR1270, MIR1294, MIR1272, MIR548I3, MIR1297, MIR320C2, MIR1306, MIR1228, MIR1266, MIR548I1, MIR1283-2, MIR1185-2, MIR1909, MIR1245A, MIR1293, MIR1291, MIR1911, MIR2110, MIR1250, MIR1226, MIR664A, MIR1179, MIR1260A, MIR1301, MIR1197, MIR1323, MIR1180, MIR1910, MIR1908, MIR1283-1, MIR1305, MIR548I2, MIR1262, MIR1227, MIR1973, MIR320B2, MIR2278, MIR663B, MIR2116, MIR2277, MIR320D1, MIR449C, MIR3128, MIR3160-2, MIR3160-1, MIR3191, MIR3188, MIR3183, MIR3074, MIR514B, MIR3182, MIR3187, MIR3123, MIR3136, MIR4306, MIR3115, MIR378C, MIR3117, MIR3192, MIR3148, MIR3202-2, MIR3124, MIR3162, MIR3170, MIR3120, MIR3194, MIR3157, MIR3154, MIR3140, MIR3190, MIR3158-1, MIR3129, MIR500B, MIR3200, MIR320E, MIR3065, MIR3127, MIR3143, MIR3153, MIR3147, MIR3189, MIR3186, MIR4326, MIR3122, MIR4284, MIR3141, MIR3144, MIR3165, MIR3180-2, MIR3131, MIR3150A, MIR3146, MIR3178, MIR4324, MIR3173, MIR4286, MIR3125, MIR3202-1, MIR3156-1, MIR3155A, MIR1260B, MIR3151, MIR3130-1, MIR3175, MIR3199-2, MIR3145, MIR3130-2, MIR3118-1, MIR3138, MIR3177, MIR3196, MIR3156-3, MIR3198-1, MIR3126, MIR3121, MIR3158-2, MIR3199-1, MIR2355, MIR3176, MIR3659, MIR3607, MIR374C, MIR3917, MIR23C, MIR3620, MIR3677, MIR3616, MIR3609, MIR3910-1, MIR3660, MIR3909, MIR3614, MIR3912, MIR3653, MIR3606, MIR3926-2, MIR3656, MIR3678, MIR3664, MIR642B, MIR3615, MIR3916, MIR3682, MIR3918, MIR3180-4, MIR3605, MIR3939, MIR3622A, MIR3936, MIR3913-2, MIR3926-1, MIR3911, MIR3679, MIR3662, MIR3688-1, MIR676, MIR3940, MIR3690, MIR3691, MIR3928, MIR3910-2, MIR3913-1, MIR3661, MIR3689B, MIR3150B, MIR3610, MIR3180-5, MIR3651, MIR4464, MIR4668, MIR4469, MIR4647, MIR4526, MIR4787, MIR4741, MIR4458, MIR4466, MIR4772, MIR4505, MIR4420, MIR4796, MIR4754, MIR378D2, MIR4739, MIR4708, MIR4498, MIR378D1, MIR4734, MIR4461, MIR4709, MIR3689F, MIR4437, MIR4667, MIR4487, MIR4753, MIR4646, MIR4457, MIR3529, MIR4724, MIR4516, MIR4485, MIR4776-1, MIR4651, MIR4422, MIR4508, MIR4766, MIR4489, MIR4645, MIR4665, MIR4791, MIR4510, MIR4450, MIR4710, MIR3688-2, MIR4478, MIR4749, MIR4750, MIR4781, MIR4524A, MIR4636, MIR4484, MIR4700, MIR4491, MIR4716, MIR219B, MIR4747, MIR4435-2, MIR4638, MIR4677, MIR4649, MIR4659A, MIR4451, MIR4532, MIR550A3, MIR4800, MIR2467, MIR4785, MIR4688, MIR4746, MIR4492, MIR4511, MIR4732, MIR4654, MIR4723, MIR4657, MIR4440, MIR4436A, MIR3198-2, MIR4520-1, MIR4691, MIR4515, MIR4518, MIR4521, MIR4443, MIR4727, MIR4786, MIR4689, MIR4707, MIR4748, MIR4755, MIR4725, MIR2682, MIR4497, MIR4476, MIR4745, MIR4520-2, MIR4767, MIR4742, MIR4429, MIR4488, MIR4776-2, MIR4446, MIR4442, MIR4423, MIR4470, MIR4517, MIR4417, MIR4706, MIR378F, MIR378E, MIR4435-1, MIR5188, MIR5004, MIR5091, MIR5001, MIR5010, MIR4999, MIR5194, MIR664B, MIR5189, MIR5196, MIR5090, MIR5088, MIR5193, MIR5703, MIR5699, MIR5187, MIR6125, MIR6499, MIR6501, MIR6512, MIR6513, MIR6514, MIR6511B1, MIR7153, MIR486-2, MIR6511B2, MIR6721, MIR6505, MIR6510, MIR6515, MIR6720, MIR941-5, MIRLET7A1, MIRLET7A2, MIRLET7A3, MIRLET7B, MIRLET7C, MIRLET7D, MIRLET7E, MIRLET7F1, MIRLET7F2, MIRLET7G, MIRLET7I, MIR100, MIR101-1, MIR101-2, MIR103A1, MIR103A2, MIR105-1, MIR105-2, MIR106A, MIR106B, MIR107, MIR10A, MIR10B, MIR1-1, MIR1-2, MIR122, MIR124-1, MIR124-2, MIR124-3, MIR125A, MIR125B1, MIR125B2, MIR126, MIR127, MIR128-1, MIR128-2, MIR129-1, MIR129-2, MIR130A, MIR130B, MIR132, MIR133A1, MIR133A2, MIR134, MIR135A1, MIR135A2, MIR136, MIR137, MIR138-1, MIR138-2, MIR139, MIR140, MIR141, MIR142, MIR143, MIR144, MIR145, MIR146A, MIR148A, MIR149, MIR150, MIR152, MIR153-1, MIR153-2, MIR154, MIR155, MIR15A, MIR15B, MIR16-1, MIR16-2, MIR17, MIR18A, MIR181A2, MIR181B1, MIR181B2, MIR181C, MIR182, MIR183, MIR184, MIR185, MIR186, MIR187, MIR188, MIR190A, MIR191, MIR192, MIR193A, MIR194-1, MIR194-2, MIR195, MIR196A1, MIR196A2, MIR197, MIR199A1, MIR199A2, MIR199B, MIR19A, MIR19B1, MIR19B2, MIR20A, MIR200A, MIR200B, MIR200C, MIR203A, MIR204, MIR205, MIR206, MIR21, MIR210, MIR211, MIR212, MIR181A1, MIR214, MIR215, MIR216A, MIR217, MIR218-1, MIR218-2, MIR219A1, MIR219A2, MIR22, MIR221, MIR222, MIR223, MIR23A, MIR23B, MIR24-1, MIR24-2, MIR25, MIR26A1, MIR26A2, MIR26B, MIR27A, MIR27B, MIR29A, MIR296, MIR299, MIR29B1, MIR29B2, MIR29C, MIR301A, MIR302A, MIR30A, MIR30B, MIR30C1, MIR30C2, MIR30D, MIR30E, MIR31, MIR32, MIR320A, MIR33A, MIR34A, MIR34B, MIR34C, MIR7-1, MIR7-2, MIR7-3, MIR9-1, MIR9-2, MIR92A1, MIR92A2, MIR93, MIR9-3, MIR96, MIR98, MIR99A, MIR99B, MIR133B, MIR135B, MIR148B, MIR302B, MIR302C, MIR302D, MIR323A, MIR324, MIR326, MIR328, MIR330, MIR331, MIR335, MIR337, MIR338, MIR339, MIR340, MIR345, MIR346, MIR376C, MIR369, MIR370, MIR373, MIR374A, MIR196B, MIR361, MIR375, MIR376A1, MIR377, MIR379, MIR380, MIR381, MIR382, MIR383, MIR423, MIR424, MIR425, MIR429, MIR449A, MIR450A1, MIR362, MIR363, MIR20B, MIR18B, MIR433, MIR431, MIR329-1, MIR329-2, MIR323B, MIR451A, MIR452, MIR409, MIR412, MIR410, MIR376B, MIR485, MIR488, MIR489, MIR490, MIR491, MIR511, MIR146B, MIR202, MIR493, MIR432, MIR494, MIR495, MIR496, MIR193B, MIR497, MIR181D, MIR512-1, MIR512-2, MIR498, MIR520F, MIR519C, MIR519B, MIR523, MIR518B, MIR524, MIR517A, MIR519D, MIR521-2, MIR517B, MIR520G, MIR516B2, MIR518E, MIR518A1, MIR516B1, MIR518A2, MIR521-1, MIR522, MIR519A1, MIR516A1, MIR516A2, MIR519A2, MIR499A, MIR500A, MIR501, MIR502, MIR450A2, MIR503, MIR504, MIR505, MIR506, MIR507, MIR509-1, MIR510, MIR514A1, MIR483, MIR484, MIR486-1, MIR487A, MIR455, MIR539, MIR545, MIR376A2, MIR487B, MIR542, MIR33B, MIR411, MIR449B, MIR532, MIR549A, MIR550A1, MIR550A2, MIR551A, MIR551B, MIR556, MIR561, MIR573, MIR574, MIR577, MIR585, MIR589, MIR590, MIR592, MIR597, MIR598, MIR605, MIR615, MIR618, MIR624, MIR627, MIR628, MIR629, MIR641, MIR642A, MIR643, MIR92B, MIR651, MIR653, MIR654, MIR655, MIR656, MIR659, MIR660, MIR663A, MIR758, MIR671, MIR767, MIR454, MIR769, MIR766, MIR765, DNAJC5
原始数据
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文献解读
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