[No authors listed]
Chromosome 5 is one of the largest human chromosomes and contains numerous intrachromosomal duplications, yet it has one of the lowest gene densities. This is partially explained by numerous gene-poor regions that display a remarkable degree of noncoding conservation with non-mammalian vertebrates, suggesting that they are functionally constrained. In total, we compiled 177.7 million base pairs of highly accurate finished sequence containing 923 manually curated protein-coding genes including the protocadherin and interleukin gene families. We also completely sequenced versions of the large chromosome-5-specific internal duplications. These duplications are very recent evolutionary events and probably have a mechanistic role in human physiological variation, as deletions in these regions are the cause of debilitating disorders including spinal muscular atrophy.
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GNPDA1, KIAA1024L, FAM196B, FAM159B, C5orf52, HSPD1P11, HSPD1P18, MTRNR2L2, HSPD1P22, OCLN, ERVK-10, C5orf67, AK6, CCNO, SMA4, KIF3A, FCHO2, CSF2, CTNND2, HBEGF, STK32A, ATP10B, EIF4E1B, KLHL3, GDF9, EFCAB9, KIAA0825, C5orf51, C5orf60, NR3C1, PFN3, IL3, IL9, ITGA1, LOC391742, LECT2, NAIP, PITX1, RBM27, NEURL1B, PCDHA13, PCDHA12, PCDHA11, PCDHA10, PCDHA8, PCDHA7, PCDHA6, PCDHA5, PCDHA4, PCDHA3, PCDHA2, PCDHA1, TENM2, ERVK-6, GRXCR2, RAP1BL, SMIM23, CBY3, ANKRD33B, C5orf42, ZDHHC11B, SMN1, SMN2, SPOCK1, TGFBI, GUSBP1, ANKDD1B, GTF2H2C_2, VDAC1, ZNF131, ANKRD55, SPZ1, SEMA5A, UBTD2, PCDHA9
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