Fine-tuning the prediction of sequences cleaved by signal peptidase II: a curated set of proven and predicted lipoproteins of Escherichia coli K-12.
[No authors listed]
摘要
A curated set of 81 proven and 44 predicted lipoproteins of Escherichia coli K-12 was defined with the combined use of a literature survey, a variety of predictive tools and human expertise. The well-documented Gram-negative proteome of E. coli K-12 was chosen to assess how the different approaches complement each other and to ensure a stable definition of a consistent set of lipoproteins. The results of detailed analysis of such proteins at the level of a single proteome are presented, corroborated and rationalized.
KEYWORDS: {{ getKeywords(articleDetailText.words) }}
基因功能
- {{$index+1}}.{{ gene }}
基因
rzoD, rzoR, ysaB, yifL, sslE, ecnA, ecnB, tatD, ydbJ, ytcA, yneO, ftsI, yaeF, metQ, yafL, yafY, mltA, pal, yaiW, panE, ybaY, cyoA, ygiB, ybgP, acrA, ybbC, mscK, loiP, fepG, rlpA, ybeT, ybfP, osmE, ybgE, ybhC, bioD, mltC, gsiB, yliF, ybjP, amiD, yajG, ycaL, mlaA, bamE, gfcE, gfcD, pgaB, yceK, csgG, fhuE, emtA, yfjS, mltD, ycjN, yfgH, chiQ, lolB, osmB, ynbE, yddW, ynfA, ynfC, lpp, ydiK, nlpC, ydjY, lptE, cusC, yoaF, yeaY, mgrB, yebF, yecR, fliL, efeB, ynjE, yecT, hslJ, wza, yegR, mepS, rtn, apbE, yfbK, elfD, nlpE, slyB, mliC, fecD, yqhH, murP, yfeW, yfeY, bamC, pqiC, bamB, flgH, yfhG, nlpD, lepB, rseC, yfiM, bamD, yfiH, yfiB, yfiL, ybdJ, mltB, yajI, ygdI, arnT, yfhM, ygdR, ygeR, yceB, ubiI, yghG, yghS, yqiG, yqiH, yraP, lpoA, nlpI, dacB, csrD, acrE, nanE, yhdV, yhfL, ggt, dcrB, slp, mdtE, bcsZ, yiaF, yiaD, yiaM, yiaB, nlpA, uhpB, yidQ, yidX, ydcL, yihN, yiiG, yjaH, yjbH, yjbF, lpoB, ycfL, mdtP, nrfG, yjeI, ampC, blc, bsmA, fimH, srlD, borD, yafT, yehR, yedD, ypdI, rcsF, gfcB, mdtQ, yaaY
原始数据
| Sample name | Organism | Experiment title | Sample type | Library instrument | Attributes | |||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| {{attr}} | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| {{ dataList.sampleTitle }} | {{ dataList.organism }} | {{ dataList.expermentTitle }} | {{ dataList.sampleType }} | {{ dataList.libraryInstrument }} | {{ showAttributeName(index,attr,dataList.attributes) }} | |||||||||||||||||||||||||||||||||||||||||||||||||
文献解读
| {{ list.authorName }} {{ list.authorName }} |
