| Type | Description |
|---|---|
| Definition | DNA-binding protein HU-beta |
| Date | Results | Publications |
|---|---|---|
| 2012-07-14 10:34:00 | By performing ChIP-seq experiments of each subunit of HU in the absence of the other subunit, genome-wide maps of DNA binding of the proteins in their hetero- and homodimeric forms were defined. | 22180530 |
| 2011-08-20 10:49:00 | It is remarkable that the observed salt concentration dependency of the binding constants of the three DNA binding modes of the HUbeta subunit is similar, given the large differences in the binding site sizes between these modes. | 21513716 |
| 2011-04-30 10:28:00 | Under physiological conditions, the three possible dimeric forms of the E. coli HU protein (EcHUalpha, EcHUbeta, and EcHUalphabeta) are in thermal equilibrium between two dimeric conformations (N<--> I) varying in their secondary structure content. | 20936276 |
| 2010-01-21 00:00:00 | An HU dimer requires 24 nt of ssDNA for initial binding, and 12 nt of ssDNA for each additional dimer binding. | 18096614 |
| 2007-11-05 21:38:00 | N-terminus verified by Edman degradation on complete protein | 215461,350619,6987059,9298646 |
| Type | IDs |
|---|---|
| Synonymous | ECK0434, dbhB, dpeA, hopD |
| Gene |
UniProtKB-ID:
DBHB_ECOLI
UniprotKB:
P0ACF4
UniParc:
UPI0000128EF7
EMBL:
U82664,
D82943,
AP009048,
X16540,
X53241,
U00096
EnsemblGenome:
b0440,
BAE76220
KO:
eco:b0440,
ecj:JW0430
|
| Nucleutide sequences |
EMBL-CDS:
AAC73543.1,
AAB40196.1,
CAA37332.1,
BAE76220.1,
CAA34539.1,
BAA11644.1
EnsemblGenome_TRS:
AAC73543,
BAE76220
|
| Protein sequencees |
EnsemblGenome_PRO:
BAE76220,
AAC73543
RefSeq:
NP_414974.1
|
| Others |
UniRef100:
UniRef100_P0ACF6
UniRef90:
UniRef90_P0ACF6
UniRef50:
UniRef50_P52681
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
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| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
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