tyrS - tyrosine--tRNA ligase-BMKCloudï½ç¾è¿å®¢äº

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948855 tyrS

基因描述

Type	Description
Definition	tyrosine--tRNA ligase

研究结论

Date	Results	Publications
2016-08-06 10:35:00	Data show that computational approaches were able to distinguish binding energy differences for individual pairs of favorable and unfavorable tyrosyl-tRNA synthetases-amino acid complexes.	26220470
2010-01-21 00:00:00	the crystal structures of the Escherichia coli TyrRS catalytic domain, in complexes with l-tyrosine and a l-tyrosyladenylate analogue, Tyr-AMS, were solved at 2.0A and 2.7A resolution, respectively	15663931
2007-11-05 21:38:00	N-terminus verified by Edman degradation on mature peptide	6761148

名称对应

Type	IDs
Synonymous	ECK1633
Gene	UniProtKB-ID: SYY_ECOLI UniprotKB: P0AGJ9 UniParc: UPI0000165472 EMBL: U00096, AP009048, M92351, J01719 EnsemblGenome: b1637, BAA15398 KO: eco:b1637, ecj:JW1629
Nucleutide sequences	EMBL-CDS: AAA24710.1, AAA24707.1, BAA15398.1, AAC74709.1 EnsemblGenome_TRS: AAC74709, BAA15398
Protein sequencees	EnsemblGenome_PRO: BAA15398, AAC74709 RefSeq: NP_416154.1
Others	UniRef100: UniRef100_A7ZM99 UniRef90: UniRef90_Q32FD6 UniRef50: UniRef50_Q32FD6

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mRNA

Protein

UniprotKB

Description

Refseq

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Pubmed编号	文献信息	发表日期	相关基因
26220470	Study of the Binding Energies between Unnatural Amino Acids and Engineered Orthogonal Tyrosyl-tRNA Synthetases. Sci Rep Wei Ren , Tan M Truong , Hui-wang Ai	2015-01-01	-
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
18304323	Protein abundance profiling of the Escherichia coli cytosol. BMC Genomics Yasushi Ishihama , Thorsten Schmidt , Juri Rappsilber , Matthias Mann , F Ulrich Hartl , Michael J Kerner , Dmitrij Frishman	2008-01-01	-
17889423	Magnesium dependence of the measured equilibrium constants of aminoacyl-tRNA synthetases. Biophys. Chem. R Kalervo Airas	2007-12-01	ileS, pheT, serS, pheS, hisS, lysS, tyrS
17187058	Absolute protein expression profiling estimates the relative contributions of transcriptional and translational regulation. Nat. Biotechnol. Peng Lu , Christine Vogel , Rong Wang , Xin Yao , Edward M Marcotte	2007-01-01	sspA, talB, dnaK, dnaJ, rpsT, ileS, dapB, carB, ftsZ, murE, aceF, acpP, surA, secA, can, aceE, panB, argF, lpxA, dksA, lpd, erpA, skp, dapD, acnB, tsf, glnH, fabZ, metQ, accA, galM, sodB, panC, pyrH, codA, opgG, pepD, tauB, eno, proC, phoR, thiI, gpmA, leuC, tig, clpP, clpX, lon, adk, htpG, acrB, trpD, apt, ydgH, rplT, purK, ompT, thrC, ybeD, ahpC, purR, glf, serA, miaB, pgm, seqA, rfbB, iscR, asnB, mprA, fldA, fur, sucA, sucB, hisJ, glnS, sucC, sucD, gltA, bioB, pheT, bioD, metK, sdhA, ybiC, tolB, ybiT, ldtB, moeA, gsiB, yliE, ihfA, serS, pflB, serC, aroA, ihfB, rpsA, mukE
16858726	A complexomic study of Escherichia coli using two-dimensional blue native/SDS polyacrylamide gel electrophoresis. Electrophoresis Jean-Paul Lasserre , Emmanuelle Beyne , SlovÃ©nie Pyndiah , Delphine Lapaillerie , StÃ©phane Claverol , Marc Bonneu	2006-08-01	sspA, talB, dnaK, mog, dapB, aceF, acpP, gpt, secA, can, aceE, panB, mrcB, dksA, lpd, skp, dapD, tsf, bamA, fabZ, sodB, panC, yahK, frmA, codA, lacI, pepD, hemB, eno, proC, gpmA, tig, clpP, htpG, dps, acrB, apt, cmtB, rfbA, hybC, ahpC, pgm, rfbB, fur, sucA, osmE, sucC, sucD, gltA, cydA, galE, pheT, metK, moaB, exbB, moeA, rihA, serS, ycaC, pflB, yajG, msbA, rpsA, uxaB, aspC, ompA, hyaB, cbdA, opgH, yniC, deoD, pck, yagU, purB, galU, dhaK, fabD, prs, nfsB, narH, narG, kdsA, ybgI, hns, adhE, sohB, fabI, tpx, pspA, hybO, uspE, narZ, fdnG, gadC, gadB, copA, pyrG, poxB, pntB
16738553	Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi	2006-01-01	pmrR, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeB, yohO, arnE, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, wecF, yigE, blr, yggP, cpxP, hdfR, thiS, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, yhaM, tdcG, ytfR, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yneM, ykfM, ylcI, yciY, yncL, ylcH, ynhF, yciZ, ydgU, ypfM, ymgI, ymgJ, dinQ
16738554	Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol. Syst. Biol. Tomoya Baba , Takeshi Ara , Miki Hasegawa , Yuki Takai , Yoshiko Okumura , Miki Baba , Kirill A Datsenko , Masaru Tomita , Barry L Wanner , Hirotada Mori	2006-01-01	yafF, ileS, dapB, ispH, ftsA, ftsZ, folA, murE, ftsI, lspA, ftsL, acpP, murF, mraY, lpxC, murD, secA, ftsQ, secM, can, lpxB, lpxA, erpA, dapD, tsf, bamA, rseP, ispU, cdsA, dnaE, lpxD, fabZ, tilS, accA, yafN, yagG, pyrH, lptD, hemB, dxr, eno, ispF, dxs, ispA, adk, ftsK, dnaX, rplT, rpmA, entD, folD, mrdB, mrdA, nadD, fldA, glnS, lptG, cydA, pheT, metK, folC, murJ, infA, cydC, serS, lpxK, msbA, rpsA, kdsB, mukF, mukB, mukE, asnS, fabA, rplY, ribD, yceQ, rne, fabG, holB, tmk, lolE, lolD, lolC, purB, cohE, minE, minD, ribA, pth, fabD, prs, ispE, lolB, hemA, prmC, kdsA, pgsA, mqsA
16397293	Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner	2006-01-01	pmrR, yfaS, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeF, yoeB, yohO, arnE, ypdJ, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, yifN, wecF, yigE, blr, yggP, cpxP, ygaY, hdfR, thiS, yedN, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, glvC, yhaM, tdcG, ytfR, yehH, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, gapC, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, yedS, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yaiX, yoeA, yneM
15671170	Structural basis of nonnatural amino acid recognition by an engineered aminoacyl-tRNA synthetase for genetic code expansion. Proc. Natl. Acad. Sci. U.S.A. Takatsugu Kobayashi , Kensaku Sakamoto , Tetsuo Takimura , Ryo Sekine , Vincent P Kelly , Kelly Vincent , Kenji Kamata , Susumu Nishimura , Shigeyuki Yokoyama	2005-02-01	-

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