hybB - hydrogenase 2 membrane subunit-BMKCloudï½ç¾è¿å®¢äº

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948615 hybB

基因描述

Type	Description
Definition	hydrogenase 2 membrane subunit

研究结论

Date	Results	Publications
2020-06-06 12:45:00	Findings show that HybB is the key subunit in proton transfer (PT). Exchange of conserved residues identified residues Y99, E133, H184, and E228 as mandatory for PT from the cytoplasm and quinol oxidation. In contrast, exchange of W54, D58, or R89 rendered Hyd-2 uni-directional and influenced the equilibrium.	31260099

名称对应

Type	IDs
Synonymous	ECK2989
Gene	UniProtKB-ID: HYBB_ECOLI UniprotKB: P37180 UniParc: UPI0000168186 EMBL: U28377, U09177, AP009048, U00096 EnsemblGenome: b2995, BAE77056 KO: ecj:JW5494, eco:b2995
Nucleutide sequences	EMBL-CDS: AAA21590.1, AAC76031.1, BAE77056.1, AAA69162.1 EnsemblGenome_TRS: BAE77056, AAC76031
Protein sequencees	EnsemblGenome_PRO: BAE77056, AAC76031 RefSeq: NP_417469.1
Others	UniRef100: UniRef100_P37180 UniRef90: UniRef90_P37180 UniRef50: UniRef50_P37180

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mRNA

Protein

UniprotKB

Description

Refseq

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Location

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Pubmed编号	文献信息	发表日期	相关基因
31260099	Amino acid variants of the HybB membrane subunit of Escherichia coli [NiFe]-hydrogenase-2 support a role in proton transfer. FEBS Lett Dorothea Lubek , Andreas H Simon , Constanze Pinske	2019-08-01	-
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
17216401	Maturation of [NiFe]-hydrogenases in Escherichia coli. Biometals Lucia Forzi , R Gary Sawers	2007-06-01	hybA, hypF, hybC, hybO, hypE, hypD, hypC, hypB, hypA, hybE, hybF, hybG, hybB, hybD
16738553	Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi	2006-01-01	pmrR, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeB, yohO, arnE, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, wecF, yigE, blr, yggP, cpxP, hdfR, thiS, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, yhaM, tdcG, ytfR, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yneM, ykfM, ylcI, yciY, yncL, ylcH, ynhF, yciZ, ydgU, ypfM, ymgI, ymgJ, dinQ
16397293	Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner	2006-01-01	pmrR, yfaS, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeF, yoeB, yohO, arnE, ypdJ, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, yifN, wecF, yigE, blr, yggP, cpxP, ygaY, hdfR, thiS, yedN, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, glvC, yhaM, tdcG, ytfR, yehH, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, gapC, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, yedS, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yaiX, yoeA, yneM
16120447	Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. J. Mol. Biol. Erik Granseth , Daniel O Daley , Mikaela Rapp , Karin MelÃ©n , Gunnar von Heijne	2005-09-23	arnE, ygaY, glvC, yfjD, cysW, ghxQ, nirC, gntU, yrdE, nhaA, yaaU, kefC, yabI, satP, setA, lspA, yfdC, ydfJ, bcr, mraY, wzzE, gcd, yadH, cdsA, metI, cyoD, yciS, yagG, yahN, rclC, codB, mhpT, pqiA, dcuC, tauC, yqeG, gfcA, brnQ, phoR, proY, cvpA, yajR, cyoE, cyoA, amtB, mdlB, mdlA, ygaZ, ftsK, acrB, fsr, ybbJ, ybbY, mscK, nuoN, fetB, ybbW, ybcI, ydgC, ydgI, fepE, cusA, yedE, pheP, fepG, cstA, fepD, yaiY, citA, mrdB, sapC, arnC, nagE, hyfE, aer, sdhC, sdhD, lptG, cydA, arnF, cydB, zitB, pnuC, mngA, opgE, modB, ybaT, ybhI, yifK, ybhL, ybhR, ybhQ, ybhN, ybhS, yqaA, exbB, potE, ybiR, gltJ
15919996	Global topology analysis of the Escherichia coli inner membrane proteome. Science Daniel O Daley , Mikaela Rapp , Erik Granseth , Karin MelÃ©n , David Drew , Gunnar von Heijne	2005-05-27	arnE, wecF, ygaY, glvC, yfjD, cysW, ghxQ, nirC, gntU, yrdE, yaaJ, nhaA, caiT, yaaU, kefC, yabI, thiP, satP, setA, lspA, yfdC, ydfJ, bcr, mraY, wzzE, nhaB, gcd, yadH, rseP, cdsA, metI, cyoD, yciS, yagG, yahN, rclC, eutH, codB, mhpT, pqiA, dcuC, tauC, yqeG, gfcA, brnQ, phoR, proY, cvpA, yajR, cyoE, betT, cyoA, amtB, mdlB, mdlA, ygaZ, ftsK, acrB, ygaH, ybbP, fsr, ybbJ, ybbY, mscK, nuoN, fetB, ybbW, yniB, ybcI, ydgC, ydgI, macB, wbbH, fepE, cusA, yedE, pheP, fepG, cstA, fepD, yaiY, citA, mrdB, cmtA, sapC, arnC, nagE, hyfE, aer, sdhC, abrB, sdhD, lptG, hycC, cydA, arnF, cydB, zitB, pnuC
11506918	H2 consumption by Escherichia coli coupled via hydrogenase 1 or hydrogenase 2 to different terminal electron acceptors. FEMS Microbiol. Lett. T V Laurinavichene , A A Tsygankov	2001-08-07	hybA, hybC, hyaA, hyaB, hyaC, hybO, hybB
10224080	Co-translocation of a periplasmic enzyme complex by a hitchhiker mechanism through the bacterial tat pathway. J Biol Chem A Rodrigue , A Chanal , K Beck , M MÃ¼ller , L F Wu	1999-05-07	-
9738917	Reassignment of the gene encoding the Escherichia coli hydrogenase 2 small subunit--identification of a soluble precursor of the small subunit in a hypB mutant. Eur. J. Biochem. F Sargent , S P Ballantine , P A Rugman , T Palmer , D H Boxer	1998-08-01	-

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