yhjD - putative transporter YhjD-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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948033 yhjD

基因描述

Type	Description
Definition	putative transporter YhjD

研究结论

Date	Results	Publications
2010-01-21 00:00:00	Study reports the identification of an arginine to cysteine substitution at position 134 of the conserved IM protein YhjD in KPM22 that acts as a compensatory suppressor mutation of the lethal DeltaKdo phenotype.	18093093

名称对应

Type	IDs
Synonymous	ECK3507
Gene	UniProtKB-ID: YHJD_ECOLI UniprotKB: P37642 UniParc: UPI000013B292 EMBL: U00039, AP009048, U00096 EnsemblGenome: BAE77772, b3522 KO: eco:b3522, ecj:JW3490
Nucleutide sequences	EMBL-CDS: AAB18498.1, AAC76547.1, BAE77772.1 EnsemblGenome_TRS: AAC76547, BAE77772
Protein sequencees	EnsemblGenome_PRO: AAC76547, BAE77772 RefSeq: NP_417979.1
Others	UniRef100: UniRef100_P37642 UniRef90: UniRef90_P37642 UniRef50: UniRef50_P37642

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mRNA

Protein

UniprotKB

Description

Refseq

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Location

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Pubmed编号	文献信息	发表日期	相关基因
22125496	Genetic interaction maps in Escherichia coli reveal functional crosstalk among cell envelope biogenesis pathways. PLoS Genet. Mohan Babu , J Javier DÃaz-MejÃa , James Vlasblom , Alla Gagarinova , Sadhna Phanse , Chris Graham , Fouad Yousif , Huiming Ding , Xuejian Xiong , Anaies Nazarians-Armavil , Md Alamgir , Mehrab Ali , Oxana Pogoutse , Asaf Pe'er , Roland Arnold , Magali Michaut , John Parkinson , Ashkan Golshani , Chris Whitfield , Shoshana J Wodak , Gabriel Moreno-Hagelsieb , Jack F Greenblatt , Andrew Emili	2011-11-01	-
18093093	Single amino acid substitutions in either YhjD or MsbA confer viability to 3-deoxy-d-manno-oct-2-ulosonic acid-depleted Escherichia coli. Mol. Microbiol. Uwe Mamat , Timothy C Meredith , Parag Aggarwal , Annika KÃ¼hl , Paul Kirchhoff , Buko Lindner , Anna Hanuszkiewicz , Jennifer Sun , Otto Holst , Ronald W Woodard	2008-02-01	-
17309111	Comparison of SDS- and methanol-assisted protein solubilization and digestion methods for Escherichia coli membrane proteome analysis by 2-D LC-MS/MS. Proteomics Nan Zhang , Rui Chen , Nelson Young , David Wishart , Philip Winter , Joel H Weiner , Liang Li	2007-02-01	-
16397293	Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner	2006-01-01	pmrR, yfaS, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeF, yoeB, yohO, arnE, ypdJ, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, yifN, wecF, yigE, blr, yggP, cpxP, ygaY, hdfR, thiS, yedN, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, glvC, yhaM, tdcG, ytfR, yehH, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, gapC, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, yedS, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yaiX, yoeA, yneM
16738553	Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi	2006-01-01	pmrR, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeB, yohO, arnE, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, wecF, yigE, blr, yggP, cpxP, hdfR, thiS, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, yhaM, tdcG, ytfR, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yneM, ykfM, ylcI, yciY, yncL, ylcH, ynhF, yciZ, ydgU, ypfM, ymgI, ymgJ, dinQ
16120447	Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. J. Mol. Biol. Erik Granseth , Daniel O Daley , Mikaela Rapp , Karin MelÃ©n , Gunnar von Heijne	2005-09-23	arnE, ygaY, glvC, yfjD, cysW, ghxQ, nirC, gntU, yrdE, nhaA, yaaU, kefC, yabI, satP, setA, lspA, yfdC, ydfJ, bcr, mraY, wzzE, gcd, yadH, cdsA, metI, cyoD, yciS, yagG, yahN, rclC, codB, mhpT, pqiA, dcuC, tauC, yqeG, gfcA, brnQ, phoR, proY, cvpA, yajR, cyoE, cyoA, amtB, mdlB, mdlA, ygaZ, ftsK, acrB, fsr, ybbJ, ybbY, mscK, nuoN, fetB, ybbW, ybcI, ydgC, ydgI, fepE, cusA, yedE, pheP, fepG, cstA, fepD, yaiY, citA, mrdB, sapC, arnC, nagE, hyfE, aer, sdhC, sdhD, lptG, cydA, arnF, cydB, zitB, pnuC, mngA, opgE, modB, ybaT, ybhI, yifK, ybhL, ybhR, ybhQ, ybhN, ybhS, yqaA, exbB, potE, ybiR, gltJ
15919996	Global topology analysis of the Escherichia coli inner membrane proteome. Science Daniel O Daley , Mikaela Rapp , Erik Granseth , Karin MelÃ©n , David Drew , Gunnar von Heijne	2005-05-27	arnE, wecF, ygaY, glvC, yfjD, cysW, ghxQ, nirC, gntU, yrdE, yaaJ, nhaA, caiT, yaaU, kefC, yabI, thiP, satP, setA, lspA, yfdC, ydfJ, bcr, mraY, wzzE, nhaB, gcd, yadH, rseP, cdsA, metI, cyoD, yciS, yagG, yahN, rclC, eutH, codB, mhpT, pqiA, dcuC, tauC, yqeG, gfcA, brnQ, phoR, proY, cvpA, yajR, cyoE, betT, cyoA, amtB, mdlB, mdlA, ygaZ, ftsK, acrB, ygaH, ybbP, fsr, ybbJ, ybbY, mscK, nuoN, fetB, ybbW, yniB, ybcI, ydgC, ydgI, macB, wbbH, fepE, cusA, yedE, pheP, fepG, cstA, fepD, yaiY, citA, mrdB, cmtA, sapC, arnC, nagE, hyfE, aer, sdhC, abrB, sdhD, lptG, hycC, cydA, arnF, cydB, zitB, pnuC
15716429	Genome-wide analysis of the general stress response network in Escherichia coli: sigmaS-dependent genes, promoters, and sigma factor selectivity. J. Bacteriol. Harald Weber , Tino Polen , Johanna Heuveling , Volker F Wendisch , Regine Hengge	2005-03-01	ybaY, ldtA, ariR, ycgZ, hdhA, ldtE, yeaG, ycgB, talA, yciF, yqaE, ygaU, ygaM, rpoS, yciG, yhbO, yhjD, yjbJ, ymgA
15576800	RpoS-regulated genes of Escherichia coli identified by random lacZ fusion mutagenesis. J. Bacteriol. Somalinga R V Vijayakumar , Mark G Kirchhof , Cheryl L Patten , Herb E Schellhorn	2004-12-01	ybaY, mltB, rpoS, yhjD
12374860	Adaptation to famine: a family of stationary-phase genes revealed by microarray analysis. Proc. Natl. Acad. Sci. U.S.A. Travis H Tani , Arkady Khodursky , Robert M Blumenthal , Patrick O Brown , Rowena G Matthews	2002-10-15	dacC, kch, slp, yhjD, lrp

研究热度

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