ybdG - miniconductance mechanosensitive channel YbdG-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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946243 ybdG

基因描述

Type	Description
Definition	miniconductance mechanosensitive channel YbdG

研究结论

Date	Results	Publications
2020-03-28 10:46:00	This study indicates that YbdG functions as a component of a mechanosensing system that transmits signals triggered by external osmotic changes to intracellular factors. The cellular role of YbdG uncovered here goes beyond its predicted function as an ion or solute transport protein.	31256002

名称对应

Type	IDs
Synonymous	ECK0569
Gene	UniProtKB-ID: YBDG_ECOLI UniprotKB: P0AAT4 UniParc: UPI000013A2EC EMBL: U07860, U00096, AP009048, D25414, U82598 EnsemblGenome: BAA35217, b0577 KO: eco:b0577, ecj:JW0566
Nucleutide sequences	EMBL-CDS: AAC43265.1, AAB40775.1, BAA35217.1, AAC73678.1 EnsemblGenome_TRS: BAA35217, AAC73678
Protein sequencees	EnsemblGenome_PRO: BAA35217, AAC73678 RefSeq: NP_415109.1
Others	UniRef100: UniRef100_P0AAT4 UniRef90: UniRef90_P0AAT4 UniRef50: UniRef50_P0AAT4

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mRNA

Protein

UniprotKB

Description

Refseq

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Pubmed编号	文献信息	发表日期	相关基因
31256002	The mechanosensitive channel YbdG from Escherichia coli has a role in adaptation to osmotic up-shock. J Biol Chem Shun Amemiya , Hayato Toyoda , Mami Kimura , Hiromi Saito , Hiroshi Kobayashi , Kunio Ihara , Kiyoto Kamagata , Ryuji Kawabata , Setsu Kato , Yutaka Nakashimada , Tadaomi Furuta , Shin Hamamoto , Nobuyuki Uozumi	2019-08-16	-
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
20616037	YbdG in Escherichia coli is a threshold-setting mechanosensitive channel with MscM activity. Proc. Natl. Acad. Sci. U.S.A. Ulrike Schumann , Michelle D Edwards , Tim Rasmussen , Wendy Bartlett , Pieter van West , Ian R Booth	2010-07-13	-
17309111	Comparison of SDS- and methanol-assisted protein solubilization and digestion methods for Escherichia coli membrane proteome analysis by 2-D LC-MS/MS. Proteomics Nan Zhang , Rui Chen , Nelson Young , David Wishart , Philip Winter , Joel H Weiner , Liang Li	2007-02-01	-
16738553	Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi	2006-01-01	pmrR, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeB, yohO, arnE, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, wecF, yigE, blr, yggP, cpxP, hdfR, thiS, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, yhaM, tdcG, ytfR, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yneM, ykfM, ylcI, yciY, yncL, ylcH, ynhF, yciZ, ydgU, ypfM, ymgI, ymgJ, dinQ
16397293	Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner	2006-01-01	pmrR, yfaS, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeF, yoeB, yohO, arnE, ypdJ, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, yifN, wecF, yigE, blr, yggP, cpxP, ygaY, hdfR, thiS, yedN, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, glvC, yhaM, tdcG, ytfR, yehH, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, gapC, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, yedS, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yaiX, yoeA, yneM
16120447	Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. J. Mol. Biol. Erik Granseth , Daniel O Daley , Mikaela Rapp , Karin MelÃ©n , Gunnar von Heijne	2005-09-23	arnE, ygaY, glvC, yfjD, cysW, ghxQ, nirC, gntU, yrdE, nhaA, yaaU, kefC, yabI, satP, setA, lspA, yfdC, ydfJ, bcr, mraY, wzzE, gcd, yadH, cdsA, metI, cyoD, yciS, yagG, yahN, rclC, codB, mhpT, pqiA, dcuC, tauC, yqeG, gfcA, brnQ, phoR, proY, cvpA, yajR, cyoE, cyoA, amtB, mdlB, mdlA, ygaZ, ftsK, acrB, fsr, ybbJ, ybbY, mscK, nuoN, fetB, ybbW, ybcI, ydgC, ydgI, fepE, cusA, yedE, pheP, fepG, cstA, fepD, yaiY, citA, mrdB, sapC, arnC, nagE, hyfE, aer, sdhC, sdhD, lptG, cydA, arnF, cydB, zitB, pnuC, mngA, opgE, modB, ybaT, ybhI, yifK, ybhL, ybhR, ybhQ, ybhN, ybhS, yqaA, exbB, potE, ybiR, gltJ
15919996	Global topology analysis of the Escherichia coli inner membrane proteome. Science Daniel O Daley , Mikaela Rapp , Erik Granseth , Karin MelÃ©n , David Drew , Gunnar von Heijne	2005-05-27	arnE, wecF, ygaY, glvC, yfjD, cysW, ghxQ, nirC, gntU, yrdE, yaaJ, nhaA, caiT, yaaU, kefC, yabI, thiP, satP, setA, lspA, yfdC, ydfJ, bcr, mraY, wzzE, nhaB, gcd, yadH, rseP, cdsA, metI, cyoD, yciS, yagG, yahN, rclC, eutH, codB, mhpT, pqiA, dcuC, tauC, yqeG, gfcA, brnQ, phoR, proY, cvpA, yajR, cyoE, betT, cyoA, amtB, mdlB, mdlA, ygaZ, ftsK, acrB, ygaH, ybbP, fsr, ybbJ, ybbY, mscK, nuoN, fetB, ybbW, yniB, ybcI, ydgC, ydgI, macB, wbbH, fepE, cusA, yedE, pheP, fepG, cstA, fepD, yaiY, citA, mrdB, cmtA, sapC, arnC, nagE, hyfE, aer, sdhC, abrB, sdhD, lptG, hycC, cydA, arnF, cydB, zitB, pnuC
12626684	Two families of mechanosensitive channel proteins. Microbiol Mol Biol Rev Christopher D Pivetti , Ming-Ren Yen , Samantha Miller , Wolfgang Busch , Yi-Hsiung Tseng , Ian R Booth , Milton H Saier	2003-03-01	-
9278503	The complete genome sequence of Escherichia coli K-12. Science F R Blattner , G Plunkett , C A Bloch , N T Perna , V Burland , M Riley , J Collado-Vides , J D Glasner , C K Rode , G F Mayhew , J Gregor , N W Davis , H A Kirkpatrick , M A Goeden , D J Rose , B Mau , Y Shao	1997-09-05	-

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