| Type | Description |
|---|---|
| Definition | conserved inner membrane protein YdgK |
| Type | IDs |
|---|---|
| Synonymous | ECK1622, rsxP |
| Gene |
UniProtKB-ID:
YDGK_ECOLI
UniprotKB:
P76180
UniParc:
UPI000013A991
EMBL:
AP009048,
U00096
EnsemblGenome:
BAE76485,
b1626
KO:
ecj:JW1618,
eco:b1626
|
| Nucleutide sequences |
EMBL-CDS:
AAC74698.2,
BAE76485.1
EnsemblGenome_TRS:
BAE76485,
AAC74698
|
| Protein sequencees |
EnsemblGenome_PRO:
AAC74698,
BAE76485
RefSeq:
NP_416143.2
|
| Others |
UniRef100:
UniRef100_P76180
UniRef90:
UniRef90_P76180
UniRef50:
UniRef50_P76180
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
{{protein.nucleotideVersion}}
Ensembl: {{protein.nucleotideEnsembl}} |
{{protein.proteinVersion}}
Ensembl: {{protein.proteinEnsembl}} |
{{uniprot}} , |
Definition: {{{protein.definition}}}Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}} |
||||
| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
||||
暂无数据
| Pubmed编号 | 文献信息 | 发表日期 | 相关基因 |
|---|---|---|---|
| 24561554 |
The binary protein-protein interaction landscape of Escherichia coli. Nat. Biotechnol. Seesandra V Rajagopala , Patricia Sikorski , Ashwani Kumar , Roberto Mosca , James Vlasblom , Roland Arnold , Jonathan Franca-Koh , Suman B Pakala , Sadhna Phanse , Arnaud Ceol , Roman Häuser , Gabriella Siszler , Stefan Wuchty , Andrew Emili , Mohan Babu , Patrick Aloy , Rembert Pieper , Peter Uetz |
2014-03-01 | - |
| 17456747 |
Cell-free complements in vivo expression of the E. coli membrane proteome. Protein Sci. David F Savage , Corey L Anderson , Yaneth Robles-Colmenares , Zachary E Newby , Robert M Stroud |
2007-05-01 |
yabI,
satP,
lspA,
yciS,
rclC,
gfcA,
cvpA,
ygaZ,
ygaH,
ybbJ,
fetB,
ybcI,
ydgC,
yaiY,
arnF,
ybhL,
ybhQ,
ybjG,
ybjM,
ybjO,
aqpZ,
ycaP,
elyC,
ybaN,
yccF,
ycdZ,
ydjM,
yagU,
ymfA,
ycfZ,
ychQ,
pgsA,
flc,
ychE,
yciC,
pgpB,
sieB,
yddG,
ydcZ,
yccA,
ydgK,
leuE,
yciB,
ydjX,
ydjZ,
yeaL,
mntP,
yebE,
yecN,
ygiZ,
yedR,
yafU,
lpxT,
yfbV,
dedA,
yfcA,
cysZ,
yfeZ,
zupT,
eamB,
marC,
ygaP,
alaE,
ygdD,
ygdQ,
yahC,
argO,
yggT,
pppA,
yghB,
pgaD,
ykgH,
pgpA,
bacA,
plsY,
ybfB,
ygjV,
mreD,
mscL,
gspO,
yhgN,
yhhN,
uspB,
yhiD,
hdeD,
yiaD,
yiaA,
yiaW,
yibI,
yiaB,
yicG,
yidI,
yidH,
yidG,
cbrB,
rhtB,
yigF,
yigG,
yiiR
|
| 16738553 |
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi |
2006-01-01 |
pmrR,
torI,
yaeP,
ykfH,
ykgO,
ylcG,
rzoD,
ybdZ,
cydX,
gnsA,
insA,
ymgF,
ymiA,
yciX,
rzoR,
ynfO,
yniD,
yobH,
yoeB,
yohO,
arnE,
ypeB,
ypfN,
ypjJ,
arfA,
yheV,
ysaB,
sgcB,
yjhX,
ytjA,
yibT,
yicS,
yidD,
yifL,
ghoT,
yjjZ,
mntS,
iroK,
wecF,
yigE,
blr,
yggP,
cpxP,
hdfR,
thiS,
greB,
rtcA,
smf,
ygcU,
ypjK,
hokE,
sslE,
glcF,
glcE,
yhaM,
tdcG,
ytfR,
hokB,
ldrD,
hokA,
ldrA,
ldrB,
ecnA,
ecnB,
yfjD,
yhdP,
yjjV,
cysW,
hokC,
ghxQ,
tatD,
yjdP,
cutC,
nirC,
frlC,
aroK,
gntU,
dgoD,
dgoA,
dgoR,
yigL,
ldrC,
ylbE,
ydbJ,
yeiW,
yehK,
yneM,
ykfM,
ylcI,
yciY,
yncL,
ylcH,
ynhF,
yciZ,
ydgU,
ypfM,
ymgI,
ymgJ,
dinQ
|
| 16397293 |
Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner |
2006-01-01 |
pmrR,
yfaS,
torI,
yaeP,
ykfH,
ykgO,
ylcG,
rzoD,
ybdZ,
cydX,
gnsA,
insA,
ymgF,
ymiA,
yciX,
rzoR,
ynfO,
yniD,
yobH,
yoeF,
yoeB,
yohO,
arnE,
ypdJ,
ypeB,
ypfN,
ypjJ,
arfA,
yheV,
ysaB,
sgcB,
yjhX,
ytjA,
yibT,
yicS,
yidD,
yifL,
ghoT,
yjjZ,
mntS,
iroK,
yifN,
wecF,
yigE,
blr,
yggP,
cpxP,
ygaY,
hdfR,
thiS,
yedN,
greB,
rtcA,
smf,
ygcU,
ypjK,
hokE,
sslE,
glcF,
glcE,
glvC,
yhaM,
tdcG,
ytfR,
yehH,
hokB,
ldrD,
hokA,
ldrA,
ldrB,
ecnA,
ecnB,
gapC,
yfjD,
yhdP,
yjjV,
cysW,
hokC,
ghxQ,
tatD,
yjdP,
cutC,
nirC,
frlC,
aroK,
gntU,
yedS,
dgoD,
dgoA,
dgoR,
yigL,
ldrC,
ylbE,
ydbJ,
yeiW,
yehK,
yaiX,
yoeA,
yneM
|
| 16120447 |
Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. J. Mol. Biol. Erik Granseth , Daniel O Daley , Mikaela Rapp , Karin Melén , Gunnar von Heijne |
2005-09-23 |
arnE,
ygaY,
glvC,
yfjD,
cysW,
ghxQ,
nirC,
gntU,
yrdE,
nhaA,
yaaU,
kefC,
yabI,
satP,
setA,
lspA,
yfdC,
ydfJ,
bcr,
mraY,
wzzE,
gcd,
yadH,
cdsA,
metI,
cyoD,
yciS,
yagG,
yahN,
rclC,
codB,
mhpT,
pqiA,
dcuC,
tauC,
yqeG,
gfcA,
brnQ,
phoR,
proY,
cvpA,
yajR,
cyoE,
cyoA,
amtB,
mdlB,
mdlA,
ygaZ,
ftsK,
acrB,
fsr,
ybbJ,
ybbY,
mscK,
nuoN,
fetB,
ybbW,
ybcI,
ydgC,
ydgI,
fepE,
cusA,
yedE,
pheP,
fepG,
cstA,
fepD,
yaiY,
citA,
mrdB,
sapC,
arnC,
nagE,
hyfE,
aer,
sdhC,
sdhD,
lptG,
cydA,
arnF,
cydB,
zitB,
pnuC,
mngA,
opgE,
modB,
ybaT,
ybhI,
yifK,
ybhL,
ybhR,
ybhQ,
ybhN,
ybhS,
yqaA,
exbB,
potE,
ybiR,
gltJ
|
| 15919996 |
Global topology analysis of the Escherichia coli inner membrane proteome. Science Daniel O Daley , Mikaela Rapp , Erik Granseth , Karin Melén , David Drew , Gunnar von Heijne |
2005-05-27 |
arnE,
wecF,
ygaY,
glvC,
yfjD,
cysW,
ghxQ,
nirC,
gntU,
yrdE,
yaaJ,
nhaA,
caiT,
yaaU,
kefC,
yabI,
thiP,
satP,
setA,
lspA,
yfdC,
ydfJ,
bcr,
mraY,
wzzE,
nhaB,
gcd,
yadH,
rseP,
cdsA,
metI,
cyoD,
yciS,
yagG,
yahN,
rclC,
eutH,
codB,
mhpT,
pqiA,
dcuC,
tauC,
yqeG,
gfcA,
brnQ,
phoR,
proY,
cvpA,
yajR,
cyoE,
betT,
cyoA,
amtB,
mdlB,
mdlA,
ygaZ,
ftsK,
acrB,
ygaH,
ybbP,
fsr,
ybbJ,
ybbY,
mscK,
nuoN,
fetB,
ybbW,
yniB,
ybcI,
ydgC,
ydgI,
macB,
wbbH,
fepE,
cusA,
yedE,
pheP,
fepG,
cstA,
fepD,
yaiY,
citA,
mrdB,
cmtA,
sapC,
arnC,
nagE,
hyfE,
aer,
sdhC,
abrB,
sdhD,
lptG,
hycC,
cydA,
arnF,
cydB,
zitB,
pnuC
|
| 12773378 |
A reducing system of the superoxide sensor SoxR in Escherichia coli. EMBO J. Mi-Sun Koo , Joon-Hee Lee , So-Yeon Rah , Won-Sik Yeo , Jin-Won Lee , Kang-Lok Lee , Young-Sang Koh , Sa-Ouk Kang , Jung-Hye Roe |
2003-06-02 |
ECs2336,
rsxD,
rsxC,
rsxB,
rsxA,
ydgK,
rsxG,
rseC,
rsxE,
soxR
|
| 11574054 |
A functional update of the Escherichia coli K-12 genome. Genome Biol. M H Serres , S Gopal , L A Nahum , P Liang , T Gaasterland , M Riley |
2001-01-01 | - |
| 10637328 |
Nucleic Acids Res. C M Gifford , S S Wallace |
2000-02-01 | - |
| 9278503 |
The complete genome sequence of Escherichia coli K-12. Science F R Blattner , G Plunkett , C A Bloch , N T Perna , V Burland , M Riley , J Collado-Vides , J D Glasner , C K Rode , G F Mayhew , J Gregor , N W Davis , H A Kirkpatrick , M A Goeden , D J Rose , B Mau , Y Shao |
1997-09-05 | - |
| 排名 | 科研单位 | 文献 |
|---|---|---|
| {{affIndex+1}} |
{{aff.value}} |
{{aff.size}} |
目前还没有研究热点单位
| 排名 | 研究人员 | 文献 |
|---|---|---|
| {{authorIndex+1}} |
{{author.value}} |
{{author.size}} |
目前还没有研究热点人员