potD - spermidine preferential ABC transporter periplasmic binding protein-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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945682 potD

基因描述

Type	Description
Definition	spermidine preferential ABC transporter periplasmic binding protein

研究结论

Date	Results	Publications
2013-12-14 11:15:00	Thus, PotD is likely to change the rate of polyamine synthesis, which stimulates the expression of SOS genes and biofilm formation.	23539287
2011-01-15 10:49:00	amino acid residues in PotB and PotC are involved in spermidine uptake activity, and spermidine passage from PotD to the cytoplasm is coupled to the ATPase activity of PotA through a structural change of PotA by its ATPase activity	20937813
2010-01-21 00:00:00	Transport proteins PotD and Crr of Escherichia coli, novel fusion partners for heterologous protein expression.	17974510
2007-11-05 21:38:00	N-terminus verified by Edman degradation on mature peptide	1939142,8740179,9298646

名称对应

Type	IDs
Synonymous	ECK1109
Gene	UniProtKB-ID: POTD_ECOLI UniprotKB: P0AFK9 UniParc: UPI0000131F9A EMBL: U00096, M64519, AP009048 EnsemblGenome: b1123, BAA35943 KO: eco:b1123, ecj:JW1109
Nucleutide sequences	EMBL-CDS: AAC74207.1, AAC37041.1, BAA35943.1 EnsemblGenome_TRS: AAC74207, BAA35943
Protein sequencees	EnsemblGenome_PRO: AAC74207, BAA35943 RefSeq: NP_415641.1
Others	UniRef100: UniRef100_P0AFK9 UniRef90: UniRef90_P0AFK9 UniRef50: UniRef50_P0AFK9

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mRNA

Protein

UniprotKB

Description

Refseq

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Ensembl: {{protein.nucleotideEnsembl}}

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Location

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Pubmed编号	文献信息	发表日期	相关基因
24140104	Comparison of the large-scale periplasmic proteomes of the Escherichia coli K-12 and B strains. J. Biosci. Bioeng. Mee-Jung Han , Jin Young Kim , Jung A Kim	2014-04-01	-
23539287	PotD protein stimulates biofilm formation by Escherichia coli. Biotechnol. Lett. Xiao Zhang , Yuzhen Zhang , Junjun Liu , Honglei Liu	2013-07-01	potD
20937813	Identification and functions of amino acid residues in PotB and PotC involved in spermidine uptake activity. J Biol Chem Kyohei Higashi , Yoshiharu Sakamaki , Emiko Herai , Risa Demizu , Takeshi Uemura , Sunil D Saroj , Risa Zenda , Yusuke Terui , Kazuhiro Nishimura , Toshihiko Toida , Keiko Kashiwagi , Kazuei Igarashi	2010-12-10	-
19493013	Dependence of swarming in Escherichia coli K-12 on spermidine and the spermidine importer. FEMS Microbiol. Lett. Shin Kurihara , Hideyuki Suzuki , Yuichi Tsuboi , Yoshimi Benno	2009-05-01	-
17974510	Transport proteins PotD and Crr of Escherichia coli, novel fusion partners for heterologous protein expression. Biochim. Biophys. Acta Kyung-Yeon Han , Hyuk-Seong Seo , Jong-Am Song , Keum-Young Ahn , Jin-Seung Park , Jeewon Lee	2007-12-01	potD, crr
17187058	Absolute protein expression profiling estimates the relative contributions of transcriptional and translational regulation. Nat. Biotechnol. Peng Lu , Christine Vogel , Rong Wang , Xin Yao , Edward M Marcotte	2007-01-01	sspA, talB, dnaK, dnaJ, rpsT, ileS, dapB, carB, ftsZ, murE, aceF, acpP, surA, secA, can, aceE, panB, argF, lpxA, dksA, lpd, erpA, skp, dapD, acnB, tsf, glnH, fabZ, metQ, accA, galM, sodB, panC, pyrH, codA, opgG, pepD, tauB, eno, proC, phoR, thiI, gpmA, leuC, tig, clpP, clpX, lon, adk, htpG, acrB, trpD, apt, ydgH, rplT, purK, ompT, thrC, ybeD, ahpC, purR, glf, serA, miaB, pgm, seqA, rfbB, iscR, asnB, mprA, fldA, fur, sucA, sucB, hisJ, glnS, sucC, sucD, gltA, bioB, pheT, bioD, metK, sdhA, ybiC, tolB, ybiT, ldtB, moeA, gsiB, yliE, ihfA, serS, pflB, serC, aroA, ihfB, rpsA, mukE
16937252	Probing the adaptive response of Escherichia coli to extracellular Zn(II). Biometals Tara K Sigdel , Renee Cilliers , Priya R Gursahaney , Peter Thompson , J Allen Easton , Michael W Crowder	2006-10-01	carB, tsf, ompX, eno, gpmA, tig, hisJ, ompF, ompA, potD, mqo, cysK, glyA, proX, gapA, sodA, tufB, groL, rplI, artI, trxB
16738553	Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi	2006-01-01	pmrR, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeB, yohO, arnE, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, wecF, yigE, blr, yggP, cpxP, hdfR, thiS, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, yhaM, tdcG, ytfR, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yneM, ykfM, ylcI, yciY, yncL, ylcH, ynhF, yciZ, ydgU, ypfM, ymgI, ymgJ, dinQ
16397293	Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner	2006-01-01	pmrR, yfaS, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeF, yoeB, yohO, arnE, ypdJ, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, yifN, wecF, yigE, blr, yggP, cpxP, ygaY, hdfR, thiS, yedN, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, glvC, yhaM, tdcG, ytfR, yehH, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, gapC, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, yedS, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yaiX, yoeA, yneM
16381841	TCDB: the Transporter Classification Database for membrane transport protein analyses and information. Nucleic Acids Res. Milton H Saier , Can V Tran , Ravi D Barabote	2006-01-01	ygaY, ecnB, cysW, hokC, nirC, dnaK, nhaA, caiT, yaaU, kefF, kefC, thiP, thiQ, satP, setA, ydfJ, bcr, uidC, secA, nhaB, fhuA, glnH, caiC, metQ, metI, metN, cyoD, phoE, yagG, yahN, codB, mhpT, dcuC, pal, lptD, tauC, tauB, tauA, yajR, cyoE, betT, cyoA, amtB, ftsK, acrB, acrA, fsr, mscK, nuoN, fetB, macB, wbbH, cusF, cusB, cusA, fepA, pheP, fepC, fepG, cstA, fepD, tatE, mrdB, fhuC, gltL, ynfF, nagE, tolR, chbB, zitB, mngA, modB, modC, modA, yajC, ybhL, lsrB, exbB, potE, tolB, glnQ, gltJ, mdfA, gsiA, gsiB, gsiC, gsiD, acrD, ybjJ, potH, potG, potF, potI, artP, aqpZ, dmsC, cydC, dmsB, dmsA

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