| Type | Description |
|---|---|
| Definition | LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated |
| Type | IDs |
|---|---|
| Synonymous | G7b |
| Gene |
UniProtKB-ID:
Q6MG66_RAT,
A0A0G2K8Q7_RAT
UniprotKB:
Q6MG66,
A0A0G2K8Q7
UniParc:
UPI0000352066,
UPI00000E839D
EMBL:
BX883045,
CH474121,
AABR07072810
Ensembl:
ENSRNOG00000048725
KO:
rno:684148
|
| Nucleutide sequences |
EMBL-CDS:
EDL83479.1,
CAE83980.1,
EDL83476.1
Gene_ORFName:
rCG_38360,
rCG_38360
Ensembl_TRS:
ENSRNOT00000070846,
ENSRNOT00000081265
|
| Protein sequencees |
Ensembl_PRO:
ENSRNOP00000065463,
ENSRNOP00000074699
RefSeq:
NP_001004073.1,
NP_001159394.1
|
| Others |
UniRef100:
UniRef100_Q6MG66,
UniRef100_Q9Y333
UniRef90:
UniRef90_Q6MG66,
UniRef90_Q9Y333
UniRef50:
UniRef50_Q9Y333,
UniRef50_Q6MG66
UniGene:
Rn.216424
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
{{protein.nucleotideVersion}}
Ensembl: {{protein.nucleotideEnsembl}} |
{{protein.proteinVersion}}
Ensembl: {{protein.proteinEnsembl}} |
{{uniprot}} , |
Definition: {{{protein.definition}}}Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}} |
||||
| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
||||
暂无数据
| Pubmed编号 | 文献信息 | 发表日期 | 相关基因 |
|---|---|---|---|
| 28781166 |
Cryo-EM Structure of a Pre-catalytic Human Spliceosome Primed for Activation. Cell Karl Bertram , Dmitry E Agafonov , Olexandr Dybkov , David Haselbach , Majety N Leelaram , Cindy L Will , Henning Urlaub , Berthold Kastner , Reinhard Lührmann , Holger Stark |
2017-08-10 | - |
| 26912367 |
Molecular architecture of the human U4/U6.U5 tri-snRNP. Science Dmitry E Agafonov , Berthold Kastner , Olexandr Dybkov , Romina V Hofele , Wen-Ti Liu , Henning Urlaub , Reinhard Lührmann , Holger Stark |
2016-03-25 | - |
| 24056301 |
Nat. Cell Biol. Michal Simicek , Sam Lievens , Mathias Laga , Dmytro Guzenko , Vasily N Aushev , Peter Kalev , Maria Francesca Baietti , Sergei V Strelkov , Kris Gevaert , Jan Tavernier , Anna A Sablina |
2013-10-01 |
RNF41,
EXOC5,
RALBP1,
PIH1D2,
EXOC8,
USP33,
TBK1,
MYO1C,
EXOC2,
LSM2,
RALA,
RALB,
EXOC4,
RAB34,
BECN1
|
| 22681889 |
The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts. Mol. Cell Alexander G Baltz , Mathias Munschauer , Björn Schwanhäusser , Alexandra Vasile , Yasuhiro Murakawa , Markus Schueler , Noah Youngs , Duncan Penfold-Brown , Kevin Drew , Miha Milek , Emanuel Wyler , Richard Bonneau , Matthias Selbach , Christoph Dieterich , Markus Landthaler |
2012-06-08 |
NBPF10,
TSFM,
LRPPRC,
RBM12,
G3BP1,
SUGP2,
MBNL2,
CEBPZ,
TRIM28,
RBM7,
RBM6,
RBM5,
ALYREF,
MPHOSPH10,
EIF1,
DDX39A,
HNRNPR,
MRPS31,
POP7,
SRRM1,
SF3B4,
AKAP8,
LOC400927-CSNK1E,
SAP18,
EIF1B,
SF3A1,
CDKN2A,
ADAR,
NPM3,
RACK1,
NSA2,
ADARB1,
RBM14,
EMG1,
NXF1,
SYNCRIP,
MYBBP1A,
DDX17,
CHERP,
NOP56,
PRPF8,
IGF2BP1,
IGF2BP3,
IGF2BP2,
KHDRBS3,
KHDRBS1,
CELF1,
CELF2,
KIF1C,
SRSF10,
UTP14A,
CPSF4,
TCERG1,
RNPS1,
SUB1,
SRSF8,
SF3A3,
HNRNPA0,
EBNA1BP2,
CKAP4,
ASCC3,
GCN1,
SF3B2,
NUDT21,
CPSF6,
DDX52,
CHD2,
DUSP14,
DIDO1,
NUPL2,
HNRNPUL1,
KRR1,
LSM6,
PSIP1,
STRAP,
SUPT16H,
MRPL3,
ATXN2L,
LARP4,
DDX42,
PDAP1,
U2AF2,
WBSCR22,
KCTD12,
CIRBP,
MRPL54,
FTSJ3,
EXOSC6,
CHCHD1,
CLK3,
CLTC,
HIST4H4,
ZC3H18,
MSI2,
MRPL10,
RAVER1,
C1orf131,
RBM45,
CPEB2
|
| 22658674 |
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. Cell Alfredo Castello , Bernd Fischer , Katrin Eichelbaum , Rastislav Horos , Benedikt M Beckmann , Claudia Strein , Norman E Davey , David T Humphreys , Thomas Preiss , Lars M Steinmetz , Jeroen Krijgsveld , Matthias W Hentze |
2012-06-08 |
GNPDA1,
SCARNA27,
GABPB1-AS1,
NFYC-AS1,
FKSG29,
PHKA2-AS1,
HDAC6,
PDCD6,
C17orf96,
LOC100287042,
MIR3652,
ARPC4-TTLL3,
ATP5J2-PTCD1,
TGIF2-C20orf24,
FARSB,
ABCC5,
ABCF2,
HUWE1,
ARPC4,
ARPC1B,
ACTR3,
ACTR1A,
LRPPRC,
TRAP1,
BCAP31,
NAMPT,
RBM12,
TOB1,
G3BP1,
SUGP2,
MBNL2,
ABI2,
CEBPZ,
ATP6AP2,
SLC25A15,
RCL1,
RBM7,
RBM6,
RBM5,
ALYREF,
PSME3,
MPHOSPH10,
NUTF2,
USPL1,
DDX39A,
STX6,
HNRNPR,
MRPS31,
RIDA,
SF3B4,
AKAP8,
STUB1,
SIGMAR1,
SMNDC1,
BCAS2,
SF3A1,
CDKN2A,
APBB3,
SMYD5,
ADAR,
EMC8,
NPM3,
HMG20A,
NOD1,
RACK1,
NDC80,
NSA2,
YAP1,
CD2BP2,
TUBGCP3,
RBM14,
EMG1,
ACAA2,
PPIE,
TAB1,
MAD2L2,
PIBF1,
SLC25A17,
NXF1,
CREB3,
LRRC41,
SYNCRIP,
ENOX2,
MYBBP1A,
DDX17,
ADARB2,
CHERP,
HYOU1,
IPO8,
NOP56,
RNASEH2A,
GLRX3,
DCTN2,
LAMTOR5,
PRDX4,
AGPAT1,
RPP30,
SLU7,
MRPL28
|
| 21873635 |
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas |
2011-09-01 | - |
| 19239890 |
The spliceosome: design principles of a dynamic RNP machine. Cell Markus C Wahl , Cindy L Will , Reinhard Lührmann |
2009-02-20 |
Snrpe,
Hnrnpm,
Hnrnpu,
Hnrnpk,
Sf1,
Snrpb,
Srsf9,
Hnrnpc,
Lsm4,
Snrpd1,
Prpf31,
Hnrnpa1,
Srsf5,
Lsm8,
Lsm3,
Prpf4,
Nhp2l1,
Ddx23,
Rbmx,
U2af2,
Prpf3,
Srsf6,
Srsf4,
Srsf10,
Srsf7,
Lsm7,
Prpf6,
Lsm6,
Snrpd2,
Snrpf,
Snrpg,
Lsm2,
U2af1,
Snrpd3,
Srsf1
|
| 17537823 |
Nucleic Acids Res. Yen-I G Chen , Roger E Moore , Helen Y Ge , Mary K Young , Terry D Lee , Scott W Stevens |
2007-01-01 |
Snrpe,
Snrpa1,
Sf3b6,
Hnrnpm,
Hnrnpu,
Hnrnpk,
Hnrnph1,
Snrpb,
Srsf9,
Hnrnpc,
Lsm4,
Snrpd1,
Sf3b3,
Sf3b2,
Sf3b4,
Hnrnpa1,
Srsf5,
Lsm8,
Lsm3,
Srsf12,
Sf3a2,
Rbmx,
Srrm2,
Ddx42,
Sf3a1,
Sf3a3,
Srrm1,
Hnrnpr,
Snrpb2,
Srsf6,
Hnrnpa2b1,
Srsf4,
Srsf10,
Srsf7,
Lsm7,
Syncrip,
Srsf2,
Hnrnpa0,
Lsm6,
Srsf11,
Snrpd2,
Snrpf,
Sf3b5,
Snrpg,
Lsm2,
Snrpd3,
Srsf1,
Hnrnpd,
Hnrnpl,
Hnrnpab,
Sf3b1
|
| 15632090 |
Gene and alternative splicing annotation with AIR. Genome Res. Liliana Florea , Valentina Di Francesco , Jason Miller , Russell Turner , Alison Yao , Michael Harris , Brian Walenz , Clark Mobarry , Gennady V Merkulov , Rosane Charlab , Ian Dew , Zuoming Deng , Sorin Istrail , Peter Li , Granger Sutton |
2005-01-01 |
Zfp867,
LOC100125362,
LOC100125364,
LOC100125367,
Ces1f,
Adat3,
Nudcd3,
LOC100125384,
Mroh1,
LOC100125598,
Rab1b,
Mfsd14a,
LOC100134871,
Usp43,
Phykpl,
Nrn1l,
Hexdc,
LOC100233176,
Zfp949,
LOC100233206,
Spns2,
Tas1r2,
LOC100271872,
LOC100302465,
Tas2r136,
Tas2r116,
Tas2r129,
Nemf,
Zfp831,
Znhit1,
E2f4,
Galnt15,
Rnh1,
Hsh2d,
Zranb1,
LOC100360645,
Fosb,
LOC100360933,
Mycbp,
Dgkq,
Prr9,
Tbcd,
Armc3,
Psmg3,
Rpl37a,
Rad9a,
Ano2,
Hoxb2,
Tram2,
Mta3,
Ppp1r2-ps1,
Ttc30a,
Gpr82,
Epc1,
Ddx55,
Txndc5,
Henmt1,
Cystm1,
Rab37,
LOC100365112,
Med7,
LOC100911593,
Clec3b,
Rps27a,
Nupr1,
Enho,
Tigd2,
Ak6,
LOC102546764,
Bivm,
Vcpkmt,
Samd11,
Xrcc3,
Tctex1d4,
Eml3,
LOC102553549,
Trim30c,
Rcor1,
Wdr90,
Hoxa2,
Hoxa3,
Hoxa1,
Peg3,
LOC103691425,
Ubl4b,
LOC103692678,
Oxld1,
LOC103693512,
Tjp2,
Crnkl1-ps1,
Nrxn2,
Slc17a7,
Oxr1,
Il13ra2,
Ces2c,
Ahnak,
Ubb,
Acp1,
Ak2
|
| 15060004 |
The genomic sequence and comparative analysis of the rat major histocompatibility complex. Genome Res. Peter Hurt , Lutz Walter , Ralf Sudbrak , Sven Klages , Ines Müller , Takashi Shiina , Hidetoshi Inoko , Hans Lehrach , Eberhard Günther , Richard Reinhardt , Heinz Himmelbauer |
2004-04-01 |
Cb707485,
Daxx,
B3galt4,
Rnf39,
Cyp21a1,
Hspa1a,
RT1-M3-1,
RT1-N3,
RT1-O1,
Tnf,
Hspa1l,
Psmb8,
RT1-M2,
RT1-S2,
Lta,
Vars,
Vps52,
Ubd,
Tubb5,
Olr1714,
Olr1730,
Olr1735,
Olr1742,
Olr1743,
Olr1744,
Olr1749,
Olr1750,
Ppp1r11,
Trim31,
RT1-M1-4,
RGD1302996,
Ddah2,
Ly6g6c,
Ly6g5c,
Prrc2a,
Ncr3,
Msh5,
Slc44a4,
Btn3a2,
Aif1,
Brd2,
Rps18,
Rgl2,
AA926063,
Cuta,
Trim26,
Trim39,
Mdc1,
Ly6g6f,
Vwa7,
Btnl2,
Ring1,
Wdr46,
Pfdn6,
Zbtb22,
RT1-N2,
Znrd1,
RT1-T24-1,
Prr3,
Ppp1r18,
Nfkbil1,
Dxo,
Trim40,
Arrb2-ps,
Olr1748,
Olr1747-ps,
Olr1746,
Olr1739,
Olr1736,
Olr1718,
Olr1716-ps,
Olr1745,
Olr1737,
Olr1740-ps,
Olr1738,
Rps25-ps1,
Sec61-ps,
Cdk2ap1-ps1,
C4b,
Gpsm3,
Egfl8,
Sapcd1,
G7e-ps1,
RT1-T18,
Dpcr1,
Rpp21,
G6b,
Ly6g6e,
Ly6g5b,
G4,
Cyp21a1-ps,
Btnl3,
Btnl6-ps1,
Stk19-ps,
Rnf5,
Olr1868,
Olr1869,
RT1-M10-1,
RT1-T24-3
|
| 排名 | 科研单位 | 文献 |
|---|---|---|
| {{affIndex+1}} |
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| 排名 | 研究人员 | 文献 |
|---|---|---|
| {{authorIndex+1}} |
{{author.value}} |
{{author.size}} |
目前还没有研究热点人员