yicR - RadC-like JAB domain-containing protein YicR-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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948968 yicR

基因描述

Type	Description
Definition	RadC-like JAB domain-containing protein YicR

名称对应

Type	IDs
Synonymous	ECK3628, radC
Gene	UniProtKB-ID: YICR_ECOLI UniprotKB: P25531 UniParc: UPI00001330B6 EMBL: AP009048, X63366, U00096, L10328, X63367 EnsemblGenome: b3638, BAE77654 KO: ecj:JW5643, eco:b3638
Nucleutide sequences	EMBL-CDS: CAA44967.1, CAA44966.1, BAE77654.1, AAC76662.2, AAA61991.1 EnsemblGenome_TRS: AAC76662, BAE77654
Protein sequencees	EnsemblGenome_PRO: AAC76662, BAE77654 RefSeq: NP_418095.4
Others	UniRef100: UniRef100_C4ZXN0 UniRef90: UniRef90_Q329L9 UniRef50: UniRef50_Q329L9

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mRNA

Protein

UniprotKB

Description

Refseq

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Ensembl: {{protein.nucleotideEnsembl}}

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Location

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Pubmed编号	文献信息	发表日期	相关基因
16710451	Predicting Shine-Dalgarno sequence locations exposes genome annotation errors. PLoS Comput. Biol. J Starmer , A Stomp , M Vouk , D Bitzer	2006-05-01	yicR
16397293	Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner	2006-01-01	pmrR, yfaS, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeF, yoeB, yohO, arnE, ypdJ, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, yifN, wecF, yigE, blr, yggP, cpxP, ygaY, hdfR, thiS, yedN, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, glvC, yhaM, tdcG, ytfR, yehH, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, gapC, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, yedS, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yaiX, yoeA, yneM
16738553	Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi	2006-01-01	pmrR, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeB, yohO, arnE, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, wecF, yigE, blr, yggP, cpxP, hdfR, thiS, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, yhaM, tdcG, ytfR, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yneM, ykfM, ylcI, yciY, yncL, ylcH, ynhF, yciZ, ydgU, ypfM, ymgI, ymgJ, dinQ
17068078	Non-canonical CRP sites control competence regulons in Escherichia coli and many other gamma-proteobacteria. Nucleic Acids Res. Andrew D S Cameron , Rosemary J Redfield	2006-01-01	smf, ppdA, ycaI, ppdD, ybaV, sxy, sbmC, crp, hofM, gntX, yifB, yicR
14973045	Identification and mapping of self-assembling protein domains encoded by the Escherichia coli K-12 genome by use of lambda repressor fusions. J Bacteriol Leonardo MariÃ±o-RamÃrez , Jonathan L Minor , Nicola Reading , James C Hu	2004-03-01	-
14737182	JAMM: a metalloprotease-like zinc site in the proteasome and signalosome. PLoS Biol. Xavier I Ambroggio , Douglas C Rees , Raymond J Deshaies	2004-01-01	Psmd7, csn5, cul1, rpn11, AT5G23540, CSN5A, yicR, rpn-11, csn-5, CSN5, PSMD14, STAMBP, COPS5, BRCC3
12627170	Identification of co-regulated genes through Bayesian clustering of predicted regulatory binding sites. Nat. Biotechnol. Zhaohui S Qin , Lee Ann McCue , William Thompson , Linda Mayerhofer , Charles E Lawrence , Jun S Liu	2003-04-01	yjjV, cysW, yigL, dnaJ, rpsT, ftsZ, surA, lpxC, nhaB, pdhR, dksA, lpd, cdsA, gmhB, metN, dinB, pyrH, mhpT, cusR, dinI, cvpA, gpmA, cyoA, acrA, ompW, nuoN, ybeD, folD, purR, serA, iscR, nagB, fur, sucC, cydA, nadA, uvrB, ybhK, moaA, gcl, ybiJ, artP, aqpZ, infA, mlc, focA, ycaD, acrR, aspC, fabA, ycbZ, matP, aroG, ycdZ, rne, ptsG, mltD, dauA, prs, yqaB, adhE, rluB, trpE, malX, yccA, aroP, ppiD, idnK, pyrG, rsxA, plsX, pykF, pheS, aroH, fadD, manX, mntP, edd, yebG, ruvA, yebK, tyrP, dnaQ, sxy, nrdA, cdd, fabF, fruB, glpA, acnA, nuoA, mutM, ndh, fecI, ptsH, mntH, gltX, rpmB, purM
12426362	DNA microarray analysis of the expression profile of Escherichia coli in response to treatment with 4,5-dihydroxy-2-cyclopenten-1-one. J Bacteriol Sangita Phadtare , Ikunoshin Kato , Masayori Inouye	2002-12-01	-
12368244	Factors influencing the identification of transcription factor binding sites by cross-species comparison. Genome Res. Lee Ann McCue , William Thompson , C Steven Carmack , Charles E Lawrence	2002-10-01	yjjV, cysW, yigL, dnaJ, rpsT, ftsZ, surA, lpxC, nhaB, pdhR, dksA, lpd, cdsA, gmhB, metN, dinB, pyrH, mhpT, cusR, dinI, cvpA, gpmA, cyoA, acrA, ompW, nuoN, ybeD, folD, purR, serA, iscR, nagB, fur, sucC, cydA, nadA, uvrB, ybhK, moaA, gcl, ybiJ, artP, aqpZ, infA, mlc, focA, ycaD, acrR, aspC, fabA, ycbZ, matP, aroG, ycdZ, rne, ptsG, mltD, dauA, prs, yqaB, adhE, rluB, trpE, malX, yccA, aroP, ppiD, idnK, pyrG, rsxA, plsX, pykF, pheS, aroH, fadD, manX, mntP, edd, yebG, ruvA, yebK, tyrP, dnaQ, sxy, nrdA, cdd, fabF, fruB, glpA, acnA, nuoA, mutM, ndh, fecI, ptsH, mntH, gltX, rpmB, purM
11489855	Characterizations of highly expressed genes of four fast-growing bacteria. J Bacteriol S Karlin , J MrÃ¡zek , A Campbell , D Kaiser	2001-09-01	-

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