appY - DNA-binding transcriptional activator AppY-BMKCloudï½ç¾è¿å®¢äº

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948797 appY

基因描述

Type	Description
Definition	DNA-binding transcriptional activator AppY

研究结论

Date	Results	Publications
2013-02-16 12:06:00	a combination of ArcA and AppY antirepression of IscR function, lower levels of IscR, and weak repression by [2Fe-2S]-IscR leads to increased hyaA promoter expression under anaerobic conditions	23065979

名称对应

Type	IDs
Synonymous	ECK0556
Gene	UniProtKB-ID: APPY_ECOLI UniprotKB: P05052 UniParc: UPI0000125CB2 EMBL: Y00138, U82598, M24530, AP009048, U00096 EnsemblGenome: b0564, BAE76339 KO: ecj:JW0553, eco:b0564
Nucleutide sequences	EMBL-CDS: AAA23454.1, CAA68331.1, BAE76339.1, AAC73665.1, AAB40760.1 EnsemblGenome_TRS: BAE76339, AAC73665
Protein sequencees	EnsemblGenome_PRO: AAC73665, BAE76339 RefSeq: NP_415096.1
Others	UniRef100: UniRef100_P05052 UniRef90: UniRef90_P05052 UniRef50: UniRef50_P05052

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mRNA

Protein

UniprotKB

Description

Refseq

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Location

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Pubmed编号	文献信息	发表日期	相关基因
27718375	Screen for genes involved in radiation survival of Escherichia coli and construction of a reference database. Mutat. Res. Neil J Sargentini , Nicholas P Gularte , Deborah A Hudman	2016-10-03	-
24561554	The binary protein-protein interaction landscape of Escherichia coli. Nat. Biotechnol. Seesandra V Rajagopala , Patricia Sikorski , Ashwani Kumar , Roberto Mosca , James Vlasblom , Roland Arnold , Jonathan Franca-Koh , Suman B Pakala , Sadhna Phanse , Arnaud Ceol , Roman HÃ¤user , Gabriella Siszler , Stefan Wuchty , Andrew Emili , Mohan Babu , Patrick Aloy , Rembert Pieper , Peter Uetz	2014-03-01	-
23065979	ArcA and AppY antagonize IscR repression of hydrogenase-1 expression under anaerobic conditions, revealing a novel mode of O2 regulation of gene expression in Escherichia coli. J. Bacteriol. A D Nesbit , A S Fleischhacker , S J Teter , P J Kiley	2012-12-01	iscR, hyaA, appY, arcA
19528070	Gains and unexpected lessons from genome-scale promoter mapping. Nucleic Acids Res K S Shavkunov , I S Masulis , M N Tutukina , A A Deev , O N Ozoline	2009-08-01	-
18383615	Multiple pathways for regulation of sigmaS (RpoS) stability in Escherichia coli via the action of multiple anti-adaptors. Mol. Microbiol. Alexandre Bougdour , Christofer Cunning , Patrick Jean Baptiste , Thomas Elliott , Susan Gottesman	2008-04-01	-
17509919	Multi-dimensional gene target search for improving lycopene biosynthesis in Escherichia coli. Metab Eng Yong-Su Jin , Gregory Stephanopoulos	2007-07-01	-
16397293	Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner	2006-01-01	pmrR, yfaS, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeF, yoeB, yohO, arnE, ypdJ, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, yifN, wecF, yigE, blr, yggP, cpxP, ygaY, hdfR, thiS, yedN, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, glvC, yhaM, tdcG, ytfR, yehH, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, gapC, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, yedS, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yaiX, yoeA, yneM
16738553	Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi	2006-01-01	pmrR, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeB, yohO, arnE, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, wecF, yigE, blr, yggP, cpxP, hdfR, thiS, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, yhaM, tdcG, ytfR, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yneM, ykfM, ylcI, yciY, yncL, ylcH, ynhF, yciZ, ydgU, ypfM, ymgI, ymgJ, dinQ
15898075	Identification of genes affecting lycopene accumulation in Escherichia coli using a shot-gun method. Biotechnol. Bioeng. Min Jung Kang , Young Mi Lee , Sang Hwal Yoon , Jung Heon Kim , So Won Ock , Kyung Hwa Jung , Yong Chul Shin , Jay D Keasling , Seon Won Kim	2005-09-05	dgoR, phoE, dxs, crl, ariR, ycgZ, rpoS, yidX, yidA, dgoK, yidB, appY, ymgA
15225322	Identification of mutator genes and mutational pathways in Escherichia coli using a multicopy cloning approach. Mol. Microbiol. Hanjing Yang , Erika Wolff , Mandy Kim , Amy Diep , Jeffrey H Miller	2004-07-01	dinB, seqA, mprA, iraM, paaX, yfjY, mutS, rpoS, dam, recG, recQ, uvrD, appY, dnaT, iraD

研究热度

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