Type | Description |
---|---|
Definition | DNA-binding transcriptional repressor UlaR |
Date | Results | Publications |
---|---|---|
2010-01-21 00:00:00 | identified the key amino acid residues that mediate L-ascorbate 6-phosphate binding and constructed the first model of regulation of a DeoR family member, establishing the basis of the ula regulon transcription control by UlaR | 18844374 |
Type | IDs |
---|---|
Synonymous | ECK4187, yjfQ |
Gene |
UniProtKB-ID:
ULAR_ECOLI
UniprotKB:
P0A9W0
UniParc:
UPI000003EAD3
EMBL:
AP009048,
U14003,
U00096,
AY625132
EnsemblGenome:
b4191,
BAE78192
KO:
eco:b4191,
ecj:JW4149
|
Nucleutide sequences |
EMBL-CDS:
AAT42486.1,
BAE78192.1,
AAC77148.1,
AAA97087.1
EnsemblGenome_TRS:
AAC77148,
BAE78192
|
Protein sequencees |
EnsemblGenome_PRO:
AAC77148,
BAE78192
RefSeq:
NP_418612.1
|
Others |
UniRef100:
UniRef100_A7ZV62
UniRef90:
UniRef90_Q328K6
UniRef50:
UniRef50_Q328K6
|
{{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
---|---|---|---|---|---|---|---|---|
Refseq |
{{protein.nucleotideVersion}}
Ensembl: {{protein.nucleotideEnsembl}} |
{{protein.proteinVersion}}
Ensembl: {{protein.proteinEnsembl}} |
{{uniprot}} , |
Definition: {{{protein.definition}}}Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}} |
||||
Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
暂无数据
Pubmed编号 | 文献信息 | 发表日期 | 相关基因 |
---|---|---|---|
24561554 |
The binary protein-protein interaction landscape of Escherichia coli. Nat. Biotechnol. Seesandra V Rajagopala , Patricia Sikorski , Ashwani Kumar , Roberto Mosca , James Vlasblom , Roland Arnold , Jonathan Franca-Koh , Suman B Pakala , Sadhna Phanse , Arnaud Ceol , Roman Häuser , Gabriella Siszler , Stefan Wuchty , Andrew Emili , Mohan Babu , Patrick Aloy , Rembert Pieper , Peter Uetz |
2014-03-01 | - |
19402753 |
Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins. PLoS Biol. Pingzhao Hu , Sarath Chandra Janga , Mohan Babu , J Javier DÃaz-MejÃa , Gareth Butland , Wenhong Yang , Oxana Pogoutse , Xinghua Guo , Sadhna Phanse , Peter Wong , Shamanta Chandran , Constantine Christopoulos , Anaies Nazarians-Armavil , Negin Karimi Nasseri , Gabriel Musso , Mehrab Ali , Nazila Nazemof , Veronika Eroukova , Ashkan Golshani , Alberto Paccanaro , Jack F Greenblatt , Gabriel Moreno-Hagelsieb , Andrew Emili |
2009-04-28 | - |
18844374 |
Biochemistry Fernando Garces , Francisco J Fernández , Antonia M Gómez , Rosa Pérez-Luque , Evangelina Campos , Rafel Prohens , Juan Aguilar , Laura Baldomà , Miquel Coll , Josefa BadÃa , M Cristina Vega |
2008-11-04 |
deoR,
ulaR
|
17906139 |
Aerobic L-ascorbate metabolism and associated oxidative stress in Escherichia coli. Microbiology (Reading, Engl.) Evangelina Campos , Cristina Montella , Fernando Garces , Laura Baldoma , Juan Aguilar , Josefa Badia |
2007-10-01 | - |
16606699 |
Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res Mohammad Arifuzzaman , Maki Maeda , Aya Itoh , Kensaku Nishikata , Chiharu Takita , Rintaro Saito , Takeshi Ara , Kenji Nakahigashi , Hsuan-Cheng Huang , Aki Hirai , Kohei Tsuzuki , Seira Nakamura , Mohammad Altaf-Ul-Amin , Taku Oshima , Tomoya Baba , Natsuko Yamamoto , Tomoyo Kawamura , Tomoko Ioka-Nakamichi , Masanari Kitagawa , Masaru Tomita , Shigehiko Kanaya , Chieko Wada , Hirotada Mori |
2006-05-01 | - |
16376935 |
J. Mol. Biol. Vivek Anantharaman , L Aravind |
2006-02-24 |
ulaR
|
16738553 |
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi |
2006-01-01 |
pmrR,
torI,
yaeP,
ykfH,
ykgO,
ylcG,
rzoD,
ybdZ,
cydX,
gnsA,
insA,
ymgF,
ymiA,
yciX,
rzoR,
ynfO,
yniD,
yobH,
yoeB,
yohO,
arnE,
ypeB,
ypfN,
ypjJ,
arfA,
yheV,
ysaB,
sgcB,
yjhX,
ytjA,
yibT,
yicS,
yidD,
yifL,
ghoT,
yjjZ,
mntS,
iroK,
wecF,
yigE,
blr,
yggP,
cpxP,
hdfR,
thiS,
greB,
rtcA,
smf,
ygcU,
ypjK,
hokE,
sslE,
glcF,
glcE,
yhaM,
tdcG,
ytfR,
hokB,
ldrD,
hokA,
ldrA,
ldrB,
ecnA,
ecnB,
yfjD,
yhdP,
yjjV,
cysW,
hokC,
ghxQ,
tatD,
yjdP,
cutC,
nirC,
frlC,
aroK,
gntU,
dgoD,
dgoA,
dgoR,
yigL,
ldrC,
ylbE,
ydbJ,
yeiW,
yehK,
yneM,
ykfM,
ylcI,
yciY,
yncL,
ylcH,
ynhF,
yciZ,
ydgU,
ypfM,
ymgI,
ymgJ,
dinQ
|
16397293 |
Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner |
2006-01-01 |
pmrR,
yfaS,
torI,
yaeP,
ykfH,
ykgO,
ylcG,
rzoD,
ybdZ,
cydX,
gnsA,
insA,
ymgF,
ymiA,
yciX,
rzoR,
ynfO,
yniD,
yobH,
yoeF,
yoeB,
yohO,
arnE,
ypdJ,
ypeB,
ypfN,
ypjJ,
arfA,
yheV,
ysaB,
sgcB,
yjhX,
ytjA,
yibT,
yicS,
yidD,
yifL,
ghoT,
yjjZ,
mntS,
iroK,
yifN,
wecF,
yigE,
blr,
yggP,
cpxP,
ygaY,
hdfR,
thiS,
yedN,
greB,
rtcA,
smf,
ygcU,
ypjK,
hokE,
sslE,
glcF,
glcE,
glvC,
yhaM,
tdcG,
ytfR,
yehH,
hokB,
ldrD,
hokA,
ldrA,
ldrB,
ecnA,
ecnB,
gapC,
yfjD,
yhdP,
yjjV,
cysW,
hokC,
ghxQ,
tatD,
yjdP,
cutC,
nirC,
frlC,
aroK,
gntU,
yedS,
dgoD,
dgoA,
dgoR,
yigL,
ldrC,
ylbE,
ydbJ,
yeiW,
yehK,
yaiX,
yoeA,
yneM
|
15690043 |
Interaction network containing conserved and essential protein complexes in Escherichia coli. Nature Gareth Butland , José Manuel PeregrÃn-Alvarez , Joyce Li , Wehong Yang , Xiaochun Yang , Veronica Canadien , Andrei Starostine , Dawn Richards , Bryan Beattie , Nevan Krogan , Michael Davey , John Parkinson , Jack Greenblatt , Andrew Emili |
2005-02-03 |
yjjV,
dnaK,
ileS,
idnD,
carB,
murE,
aceF,
murD,
gcd,
can,
yadG,
aceE,
lpxB,
lpd,
tsf,
sufD,
ldcC,
accA,
metN,
panC,
ispF,
yajQ,
ybaY,
adk,
htpG,
ftsK,
dnaX,
fau,
loiP,
napD,
yedE,
ybdL,
hscC,
ybeD,
glf,
rlmH,
ubiF,
pgm,
sucB,
rsuA,
pheT,
ybhK,
moaC,
moaD,
moaE,
ybhF,
folC,
moeB,
moeA,
ybjQ,
serC,
kdsB,
ycbX,
uup,
cspG,
ymdF,
ndk,
ycfH,
nagK,
cobB,
purB,
bluR,
dhaK,
sufB,
ispE,
narH,
narG,
narJ,
yciU,
ychJ,
adhE,
topA,
rnb,
fabI,
tyrR,
hybO,
ynbC,
ynbD,
ycjY,
ydcP,
narZ,
ydcZ,
mcbR,
gadB,
hipA,
ydfR,
ynfB,
intQ,
topB,
rnt,
intA,
gloA,
nemR,
grxD,
ydhR,
ydiB,
ppsR,
ydaY,
thrS
|
15714875 |
Gene regulation at-a-distance in E. coli: new insights. C. R. Biol. Michèle Amouyal |
2005-01-01 | - |
排名 | 科研单位 | 文献 |
---|---|---|
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---|---|---|
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