| Type | Description |
|---|---|
| Definition | RNA-binding protein Hfq |
| Date | Results | Publications |
|---|---|---|
| 2021-03-20 13:26:00 | Hfq CLASH uncovers sRNA-target interaction networks linked to nutrient availability adaptation. | 32356726 |
| 2021-01-23 12:59:00 | The RNA-binding protein Hfq assembles into foci-like structures in nitrogen starved Escherichia coli. | 32532816 |
| 2020-07-11 11:49:00 | Structure studies of an Escherichia coli Hfq Core and DNA complex reveals multifunctional binding sites. | 32133526 |
| 2019-12-07 10:48:00 | Polynucleotide phosphorylase promotes the stability and function of Hfq-binding sRNAs by degrading target mRNA-derived fragments. | 31329973 |
| 2019-07-27 13:06:00 | Based on expression studies with site-directed mutants, an OFF-ON-OFF toggle model is proposed that results in transient translation of SepL and EspA filament assembly. Under this model, the nascent mRNA is translationally off, before being activated by CsrA, and then repressed by Hfq and Spot42. | 29432565 |
| Type | IDs |
|---|---|
| Synonymous | ECK4168 |
| Gene |
UniProtKB-ID:
HFQ_ECOLI
UniprotKB:
P0A6X3
UniParc:
UPI00001562A2
EMBL:
M63655,
D00743,
U00096,
U14003,
U00005,
AP009048
EnsemblGenome:
b4172,
BAE78173
KO:
eco:b4172,
ecj:JW4130
|
| Nucleutide sequences |
EMBL-CDS:
AAA24175.1,
BAE78173.1,
AAC77129.1,
AAC43397.1,
AAA97068.1,
BAA00644.1
EnsemblGenome_TRS:
BAE78173,
AAC77129
|
| Protein sequencees |
EnsemblGenome_PRO:
AAC77129,
BAE78173
RefSeq:
NP_418593.1
|
| Others |
UniRef100:
UniRef100_A7ZV41
UniRef90:
UniRef90_A8AMM9
UniRef50:
UniRef50_Q6D067
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
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| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
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