phnF - putative transcriptional regulator PhnF-BMKCloudï½ç¾è¿å®¢äº

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948617 phnF

基因描述

Type	Description
Definition	putative transcriptional regulator PhnF

研究结论

Date	Results	Publications
2010-01-21 00:00:00	PHNF structure is a mixture of alpha-helices and beta-strands, with a six-stranded antiparallel beta-sheet at the core. C-PhnF monomers form a dimer by establishing interdomain eight-strand beta-sheets.	16672238

名称对应

Type	IDs
Synonymous	ECK4095
Gene	UniProtKB-ID: PHNF_ECOLI UniprotKB: P16684 UniParc: UPI0000131995 EMBL: J05260, U00096, U14003, AP009048, D90227 EnsemblGenome: BAE78105, b4102 KO: eco:b4102, ecj:JW4063
Nucleutide sequences	EMBL-CDS: BAE78105.1, AAA97001.1, BAA14266.1, AAA24343.1, AAC77063.1 EnsemblGenome_TRS: AAC77063, BAE78105
Protein sequencees	EnsemblGenome_PRO: AAC77063, BAE78105 RefSeq: NP_418526.1
Others	UniRef100: UniRef100_P16684 UniRef90: UniRef90_P16684 UniRef50: UniRef50_P16684

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mRNA

Protein

UniprotKB

Description

Refseq

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Location

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Pubmed编号	文献信息	发表日期	相关基因
16672238	Structural characterization of GntR/HutC family signaling domain. Protein Sci. Marina Gorelik , Vladimir V Lunin , Tatiana Skarina , Alexei Savchenko	2006-06-01	-
16738553	Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi	2006-01-01	pmrR, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeB, yohO, arnE, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, wecF, yigE, blr, yggP, cpxP, hdfR, thiS, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, yhaM, tdcG, ytfR, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yneM, ykfM, ylcI, yciY, yncL, ylcH, ynhF, yciZ, ydgU, ypfM, ymgI, ymgJ, dinQ
16397293	Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner	2006-01-01	pmrR, yfaS, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeF, yoeB, yohO, arnE, ypdJ, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, yifN, wecF, yigE, blr, yggP, cpxP, ygaY, hdfR, thiS, yedN, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, glvC, yhaM, tdcG, ytfR, yehH, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, gapC, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, yedS, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yaiX, yoeA, yneM
12757941	HutC/FarR-like bacterial transcription factors of the GntR family contain a small molecule-binding domain of the chorismate lyase fold. FEMS Microbiol. Lett. L Aravind , Vivek Anantharaman	2003-05-16	mngR, phnF
11756427	Subdivision of the helix-turn-helix GntR family of bacterial regulators in the FadR, HutC, MocR, and YtrA subfamilies. J Biol Chem SÃ©bastien Rigali , Adeline Derouaux , Fabrizio Giannotta , Jean Dusart	2002-04-12	-
9278503	The complete genome sequence of Escherichia coli K-12. Science F R Blattner , G Plunkett , C A Bloch , N T Perna , V Burland , M Riley , J Collado-Vides , J D Glasner , C K Rode , G F Mayhew , J Gregor , N W Davis , H A Kirkpatrick , M A Goeden , D J Rose , B Mau , Y Shao	1997-09-05	-
7610040	Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes. Nucleic Acids Res. V Burland , G Plunkett , H J Sofia , D L Daniels , F R Blattner	1995-06-25	-
8388873	Mutational analysis of an Escherichia coli fourteen-gene operon for phosphonate degradation, using TnphoA' elements. J. Bacteriol. W W Metcalf , B L Wanner	1993-06-01	-
1335942	Molecular genetic studies of a 10.9-kb operon in Escherichia coli for phosphonate uptake and biodegradation. FEMS Microbiol. Lett. B L Wanner , W W Metcalf	1992-12-15	phnO, phnP, phnI, phnJ, phnN, phnK, phnL, phnM, phnF, phnG, phnH, phnC, phnD, phnE
2060763	A new family of bacterial regulatory proteins. FEMS Microbiol. Lett. D J Haydon , J R Guest	1991-04-15	-

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