rapA - RNA polymerase-binding ATPase and RNAP recycling factor-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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948523 rapA

基因描述

Type	Description
Definition	RNA polymerase-binding ATPase and RNAP recycling factor

研究结论

Date	Results	Publications
2011-10-29 12:15:00	biochemical properties of RapA and role in RNAP recycling during transcription [review]	21419241
2010-01-21 00:00:00	Mutations in the interface between RapA's SWI/SNF family chromatin remodeling complex and double-stranded nucleic acid-binding domains significantly alter adenosine triphosphate (ATP) hydrolysis in purified RapA.	19580329
2010-01-21 00:00:00	A comparison of the biofilm matrix of the wild-type and rapA strains revealed decreased polysaccharide quantities and coverage in the mutant biofilms	17664315
2010-01-21 00:00:00	RapA binds and remodels RNA during transcription.	17913745
2007-11-05 21:38:00	N-terminus verified by Edman degradation on mature peptide	9614128,11751638

名称对应

Type	IDs
Synonymous	ECK0060, hepA, yabA
Gene	UniProtKB-ID: RAPA_ECOLI UniprotKB: P60240 UniParc: UPI0000165391 EMBL: X54847, U00096, AP009048 EnsemblGenome: b0059, BAB96627 KO: eco:b0059, ecj:JW0058
Nucleutide sequences	EMBL-CDS: CAA38617.1, BAB96627.1, AAC73170.1 EnsemblGenome_TRS: BAB96627, AAC73170
Protein sequencees	EnsemblGenome_PRO: AAC73170, BAB96627 RefSeq: NP_414601.1
Others	UniRef100: UniRef100_B7MAI2 UniRef90: UniRef90_Q8ZRV8 UniRef50: UniRef50_Q8ZRV8

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mRNA

Protein

UniprotKB

Description

Refseq

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Location

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Pubmed编号	文献信息	发表日期	相关基因
24561554	The binary protein-protein interaction landscape of Escherichia coli. Nat. Biotechnol. Seesandra V Rajagopala , Patricia Sikorski , Ashwani Kumar , Roberto Mosca , James Vlasblom , Roland Arnold , Jonathan Franca-Koh , Suman B Pakala , Sadhna Phanse , Arnaud Ceol , Roman HÃ¤user , Gabriella Siszler , Stefan Wuchty , Andrew Emili , Mohan Babu , Patrick Aloy , Rembert Pieper , Peter Uetz	2014-03-01	-
21419241	Structure and function of RapA: a bacterial Swi2/Snf2 protein required for RNA polymerase recycling in transcription. Biochim. Biophys. Acta Ding Jun Jin , Yan Ning Zhou , Gary Shaw , Xinhua Ji	2011-09-01	-
19580329	RapA, the SWI/SNF subunit of Escherichia coli RNA polymerase, promotes the release of nascent RNA from transcription complexes. Biochemistry Brandon Yawn , Lin Zhang , Cameron Mura , Maxim V Sukhodolets	2009-08-25	slyD, rapA
18786404	Structure of RapA, a Swi2/Snf2 protein that recycles RNA polymerase during transcription. Structure Gary Shaw , Jianhua Gan , Yan Ning Zhou , Huijun Zhi , Priadarsini Subburaman , Rongguang Zhang , Andrzej Joachimiak , Ding Jun Jin , Xinhua Ji	2008-09-10	-
18786392	RapA: completing the transcription cycle? Structure Sergei Nechaev , Konstantin Severinov	2008-09-10	rapA
17664315	Role of the rapA gene in controlling antibiotic resistance of Escherichia coli biofilms. Antimicrob. Agents Chemother. S V Lynch , L Dixon , M R Benoit , E L Brodie , M Keyhan , P Hu , D F Ackerley , G L Andersen , A Matin	2007-10-01	yeeZ, aaeA, rapA
17913745	Escherichia coli RNA polymerase-associated SWI/SNF protein RapA: evidence for RNA-directed binding and remodeling activity. Nucleic Acids Res. Brian A McKinley , Maxim V Sukhodolets	2007-01-01	rapA
17187058	Absolute protein expression profiling estimates the relative contributions of transcriptional and translational regulation. Nat. Biotechnol. Peng Lu , Christine Vogel , Rong Wang , Xin Yao , Edward M Marcotte	2007-01-01	sspA, talB, dnaK, dnaJ, rpsT, ileS, dapB, carB, ftsZ, murE, aceF, acpP, surA, secA, can, aceE, panB, argF, lpxA, dksA, lpd, erpA, skp, dapD, acnB, tsf, glnH, fabZ, metQ, accA, galM, sodB, panC, pyrH, codA, opgG, pepD, tauB, eno, proC, phoR, thiI, gpmA, leuC, tig, clpP, clpX, lon, adk, htpG, acrB, trpD, apt, ydgH, rplT, purK, ompT, thrC, ybeD, ahpC, purR, glf, serA, miaB, pgm, seqA, rfbB, iscR, asnB, mprA, fldA, fur, sucA, sucB, hisJ, glnS, sucC, sucD, gltA, bioB, pheT, bioD, metK, sdhA, ybiC, tolB, ybiT, ldtB, moeA, gsiB, yliE, ihfA, serS, pflB, serC, aroA, ihfB, rpsA, mukE
16849790	Global analysis of candidate genes important for fitness in a competitive biofilm using DNA-array-based transposon mapping. Microbiology (Reading, Engl.) Lauren M Junker , Joseph E Peters , Anthony G Hay	2006-08-01	ygaY, glvC, ytfR, nirC, aroK, yjhR, sspA, folA, setA, secM, lpxB, glnD, yafJ, insH1, ykfJ, insH1, panC, yahJ, renD, yajQ, priC, leuC, betT, dps, fsr, ybbJ, ydgI, fau, quuD, fepG, ybdH, cmtA, iscR, ddlA, ybgD, chbB, yagN, ybhJ, ybiH, ybiT, ybiY, nanR, ybjO, ycaN, ycaP, ycbU, hspQ, pgaA, cyoB, ycdZ, mdtG, yceH, ptsG, ycjM, holB, lolE, cspD, pspF, icd, btuR, yagL, rnb, insH1, hybO, recE, feaB, insH1, ydcU, ddpD, ddpC, narV, narW, ydfG, ynfL, mmuM, insH1, rstA, ycgL, ydjG, cheW, araF, insH1, yeeP, insH1, wcaJ, yehE, yehC, yehA, fruA, osmF, glpT, menC, cynX, flk, uxuB, accD, mnmC, yfcR, emrY
16818608	Regulon and promoter analysis of the E. coli heat-shock factor, sigma32, reveals a multifaceted cellular response to heat stress. Genes Dev Gen Nonaka , Matthew Blankschien , Christophe Herman , Carol A Gross , Virgil A Rhodius	2006-07-01	-

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