| Type | Description |
|---|---|
| Definition | DNA ligase B |
| Type | IDs |
|---|---|
| Synonymous | ECK3637, yicF |
| Gene |
UniProtKB-ID:
LIGB_ECOLI
UniprotKB:
P25772
UniParc:
UPI000013B396
EMBL:
M84400,
U00096,
AP009048,
L10328
EnsemblGenome:
BAE77646,
b3647
KO:
ecj:JW3622,
eco:b3647
|
| Nucleutide sequences |
EMBL-CDS:
BAE77646.1,
AAA62000.1,
AAB88710.1,
AAC76671.2
EnsemblGenome_TRS:
BAE77646,
AAC76671
|
| Protein sequencees |
EnsemblGenome_PRO:
AAC76671,
BAE77646
RefSeq:
NP_418104.2
|
| Others |
UniRef100:
UniRef100_C4ZXN9
UniRef90:
UniRef90_Q8XD89
UniRef50:
UniRef50_Q8XD89
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
{{protein.nucleotideVersion}}
Ensembl: {{protein.nucleotideEnsembl}} |
{{protein.proteinVersion}}
Ensembl: {{protein.proteinEnsembl}} |
{{uniprot}} , |
Definition: {{{protein.definition}}}Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}} |
||||
| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
||||
暂无数据
| Pubmed编号 | 文献信息 | 发表日期 | 相关基因 |
|---|---|---|---|
| 28700629 |
Escherichia coli DNA ligase B may mitigate damage from oxidative stress. PLoS One Truston J Bodine , Michael A Evangelista , Huan Ting Chang , Christopher A Ayoub , Buck S Samuel , Richard Sucgang , Lynn Zechiedrich |
2017-01-01 | - |
| 21873635 |
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas |
2011-09-01 | - |
| 18262407 |
DNA and RNA ligases: structural variations and shared mechanisms. Curr. Opin. Struct. Biol. John M Pascal |
2008-02-01 |
ligT,
ligA,
ligB
|
| 17040898 |
Nucleic Acids Res. Bijoy K Mohanty , Sidney R Kushner |
2006-01-01 |
ompA,
lpp,
pcnB,
pnp,
ligB,
glmS
|
| 16397293 |
Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner |
2006-01-01 |
pmrR,
yfaS,
torI,
yaeP,
ykfH,
ykgO,
ylcG,
rzoD,
ybdZ,
cydX,
gnsA,
insA,
ymgF,
ymiA,
yciX,
rzoR,
ynfO,
yniD,
yobH,
yoeF,
yoeB,
yohO,
arnE,
ypdJ,
ypeB,
ypfN,
ypjJ,
arfA,
yheV,
ysaB,
sgcB,
yjhX,
ytjA,
yibT,
yicS,
yidD,
yifL,
ghoT,
yjjZ,
mntS,
iroK,
yifN,
wecF,
yigE,
blr,
yggP,
cpxP,
ygaY,
hdfR,
thiS,
yedN,
greB,
rtcA,
smf,
ygcU,
ypjK,
hokE,
sslE,
glcF,
glcE,
glvC,
yhaM,
tdcG,
ytfR,
yehH,
hokB,
ldrD,
hokA,
ldrA,
ldrB,
ecnA,
ecnB,
gapC,
yfjD,
yhdP,
yjjV,
cysW,
hokC,
ghxQ,
tatD,
yjdP,
cutC,
nirC,
frlC,
aroK,
gntU,
yedS,
dgoD,
dgoA,
dgoR,
yigL,
ldrC,
ylbE,
ydbJ,
yeiW,
yehK,
yaiX,
yoeA,
yneM
|
| 16738553 |
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi |
2006-01-01 |
pmrR,
torI,
yaeP,
ykfH,
ykgO,
ylcG,
rzoD,
ybdZ,
cydX,
gnsA,
insA,
ymgF,
ymiA,
yciX,
rzoR,
ynfO,
yniD,
yobH,
yoeB,
yohO,
arnE,
ypeB,
ypfN,
ypjJ,
arfA,
yheV,
ysaB,
sgcB,
yjhX,
ytjA,
yibT,
yicS,
yidD,
yifL,
ghoT,
yjjZ,
mntS,
iroK,
wecF,
yigE,
blr,
yggP,
cpxP,
hdfR,
thiS,
greB,
rtcA,
smf,
ygcU,
ypjK,
hokE,
sslE,
glcF,
glcE,
yhaM,
tdcG,
ytfR,
hokB,
ldrD,
hokA,
ldrA,
ldrB,
ecnA,
ecnB,
yfjD,
yhdP,
yjjV,
cysW,
hokC,
ghxQ,
tatD,
yjdP,
cutC,
nirC,
frlC,
aroK,
gntU,
dgoD,
dgoA,
dgoR,
yigL,
ldrC,
ylbE,
ydbJ,
yeiW,
yehK,
yneM,
ykfM,
ylcI,
yciY,
yncL,
ylcH,
ynhF,
yciZ,
ydgU,
ypfM,
ymgI,
ymgJ,
dinQ
|
| 11812821 |
A second NAD(+)-dependent DNA ligase (LigB) in Escherichia coli. Nucleic Acids Res. V Sriskanda , S Shuman |
2001-12-15 | - |
| 9278503 |
The complete genome sequence of Escherichia coli K-12. Science F R Blattner , G Plunkett , C A Bloch , N T Perna , V Burland , M Riley , J Collado-Vides , J D Glasner , C K Rode , G F Mayhew , J Gregor , N W Davis , H A Kirkpatrick , M A Goeden , D J Rose , B Mau , Y Shao |
1997-09-05 | - |
| 8390989 |
Guanylate kinase of Escherichia coli K-12. J Biol Chem D Gentry , C Bengra , K Ikehara , M Cashel |
1993-07-05 | - |
| 7686882 |
Genomics V Burland , G Plunkett , D L Daniels , F R Blattner |
1993-06-01 |
yicS,
glvG,
glvC,
dgoD,
dgoA,
dgoR,
rpmG,
mutM,
rpmB,
dinD,
yicC,
rph,
pyrE,
slmA,
spoT,
rpoZ,
trmH,
recG,
gmk,
ligB,
yicG,
gltS,
yicJ,
yicI,
yicH,
xanP,
yicN,
adeQ,
nlpA,
yicL,
setC,
uhpA,
yidF,
emrD,
ivbL,
ilvB,
ilvN,
uhpC,
yidK,
yidL,
yidJ,
yidI,
yidH,
yidG,
ibpB,
yidE,
yidP,
uhpB,
dgoT,
cbrA,
yidR,
yidQ,
ibpA,
uhpT,
yidX,
yidA,
dgoK,
recF,
adeD,
gyrB,
yidB,
nepI,
yidC,
rnpA,
rpmH,
dnaA,
dnaN,
mdtL,
tnaB,
tnaA,
mnmE,
tnaC,
adeP,
chrR,
yieE,
yidZ,
bglH,
yieK,
cbrC,
cbrB,
yieH,
phoU,
bglB,
bglG,
bglF,
pstS,
pstC,
pstA,
pstB,
glmS,
atpA,
atpG,
atpD,
atpC,
glmU,
atpF,
mnmG,
mioC,
rsmG
|
| 排名 | 科研单位 | 文献 |
|---|---|---|
| {{affIndex+1}} |
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| 排名 | 研究人员 | 文献 |
|---|---|---|
| {{authorIndex+1}} |
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目前还没有研究热点人员