xylR - DNA-binding transcriptional dual regulator XylR-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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948086 xylR

基因描述

Type	Description
Definition	DNA-binding transcriptional dual regulator XylR

研究结论

Date	Results	Publications
2018-06-02 10:02:00	two amino acid substitutions in XylR enhance xylose utilization and release glucose-induced repression in different E. coli hosts, including wild type, suggesting its potential wide application in industrial E. coli biocatalysts	28655843

名称对应

Type	IDs
Synonymous	ECK3558
Gene	UniProtKB-ID: XYLR_ECOLI UniprotKB: P0ACI3 UniParc: UPI000013906B EMBL: U00039, U00096, AP009048 EnsemblGenome: BAE77724, b3569 KO: eco:b3569, ecj:JW3541
Nucleutide sequences	EMBL-CDS: AAC76593.1, AAB18546.1, BAE77724.1 EnsemblGenome_TRS: BAE77724, AAC76593
Protein sequencees	EnsemblGenome_PRO: AAC76593, BAE77724 RefSeq: NP_418026.1
Others	UniRef100: UniRef100_P0ACI5 UniRef90: UniRef90_P0ACI5 UniRef50: UniRef50_P45043

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mRNA

Protein

UniprotKB

Description

Refseq

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Pubmed编号	文献信息	发表日期	相关基因
28655843	Experimental evolution reveals an effective avenue to release catabolite repression via mutations in XylR. Proc. Natl. Acad. Sci. U.S.A. Christian Sievert , Lizbeth M Nieves , Larry A Panyon , Taylor Loeffler , Chandler Morris , Reed A Cartwright , Xuan Wang	2017-07-11	-
26527647	Reciprocal Regulation of l-Arabinose and d-Xylose Metabolism in Escherichia coli. J. Bacteriol. Santosh Koirala , Xiaoyi Wang , Christopher V Rao	2016-02-01	-
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
19269243	Allostery in the LacI/GalR family: variations on a theme. Curr. Opin. Microbiol. Liskin Swint-Kruse , Kathleen S Matthews	2009-04-01	cra, lacI, purR, ycjW, malI, ascG, galR, ebgR, gntR, xylR, rbsR, cytR, treR, galS, idnR
16397293	Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner	2006-01-01	pmrR, yfaS, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeF, yoeB, yohO, arnE, ypdJ, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, yifN, wecF, yigE, blr, yggP, cpxP, ygaY, hdfR, thiS, yedN, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, glvC, yhaM, tdcG, ytfR, yehH, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, gapC, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, yedS, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yaiX, yoeA, yneM
16738553	Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi	2006-01-01	pmrR, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeB, yohO, arnE, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, wecF, yigE, blr, yggP, cpxP, hdfR, thiS, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, yhaM, tdcG, ytfR, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yneM, ykfM, ylcI, yciY, yncL, ylcH, ynhF, yciZ, ydgU, ypfM, ymgI, ymgJ, dinQ
11752325	AraC-XylS database: a family of positive transcriptional regulators in bacteria. Nucleic Acids Res. Raquel Tobes , Juan L Ramos	2002-01-01	-
11750821	Computational analysis of the transcriptional regulation of pentose utilization systems in the gamma subdivision of Proteobacteria. FEMS Microbiol. Lett. O N Laikova , A A Mironov , M S Gelfand	2001-12-18	crp, xylR, rbsR
9409145	Arac/XylS family of transcriptional regulators. Microbiol Mol Biol Rev M T Gallegos , R Schleif , A Bairoch , K Hofmann , J L Ramos	1997-12-01	-
9371449	Organization and regulation of the D-xylose operons in Escherichia coli K-12: XylR acts as a transcriptional activator. J. Bacteriol. S Song , C Park	1997-11-01	-

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