| Type | Description |
|---|---|
| Definition | putative DNA-binding transcriptional regulator DctR |
| Date | Results | Publications |
|---|---|---|
| 2016-06-28 11:49:00 | RcsB forms heterodimers with MatA (also known as EcpR) and with DctR | 26635367 |
| Type | IDs |
|---|---|
| Synonymous | ECK3491, yhiF |
| Gene |
UniProtKB-ID:
DCTR_ECOLI
UniprotKB:
P37195
UniParc:
UPI000013B26A
EMBL:
AP009048,
L23635,
U00096,
U00039
EnsemblGenome:
b3507,
BAE77787
KO:
eco:b3507,
ecj:JW3475
|
| Nucleutide sequences |
EMBL-CDS:
AAA60371.1,
AAB18483.1,
AAC76532.1,
BAE77787.1
EnsemblGenome_TRS:
BAE77787,
AAC76532
|
| Protein sequencees |
EnsemblGenome_PRO:
BAE77787,
AAC76532
RefSeq:
NP_417964.1
|
| Others |
UniRef100:
UniRef100_P37195
UniRef90:
UniRef90_P37195
UniRef50:
UniRef50_P37195
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
{{protein.nucleotideVersion}}
Ensembl: {{protein.nucleotideEnsembl}} |
{{protein.proteinVersion}}
Ensembl: {{protein.proteinEnsembl}} |
{{uniprot}} , |
Definition: {{{protein.definition}}}Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}} |
||||
| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
||||
暂无数据
| Pubmed编号 | 文献信息 | 发表日期 | 相关基因 |
|---|---|---|---|
| 26635367 |
J Biol Chem Derk Pannen , Maria Fabisch , Lisa Gausling , Karin Schnetz |
2016-01-29 | - |
| 24561554 |
The binary protein-protein interaction landscape of Escherichia coli. Nat. Biotechnol. Seesandra V Rajagopala , Patricia Sikorski , Ashwani Kumar , Roberto Mosca , James Vlasblom , Roland Arnold , Jonathan Franca-Koh , Suman B Pakala , Sadhna Phanse , Arnaud Ceol , Roman Häuser , Gabriella Siszler , Stefan Wuchty , Andrew Emili , Mohan Babu , Patrick Aloy , Rembert Pieper , Peter Uetz |
2014-03-01 | - |
| 18287020 |
Quantifying changes in the thiol redox proteome upon oxidative stress in vivo. Proc. Natl. Acad. Sci. U.S.A. Lars I Leichert , Florian Gehrke , Harini V Gudiseva , Tom Blackwell , Marianne Ilbert , Angela K Walker , John R Strahler , Philip C Andrews , Ursula Jakob |
2008-06-17 |
fhuA,
acnB,
yafJ,
ahpC,
hisJ,
ompA,
ndk,
prs,
oppA,
adhE,
tpx,
infC,
yebF,
znuA,
gnd,
glyA,
alaS,
guaA,
pgk,
yggX,
thrB,
argG,
gapA,
ftsH,
rpsD,
rpsQ,
rplN,
tufA,
mdh,
argD,
asd,
ugpB,
dctR,
dppA,
grxC,
rpmE,
ppc,
pepA,
glcB,
proQ,
artI,
yedD,
rcsF
|
| 17259322 |
J. Bacteriol. Aaron K Mates , Atef K Sayed , John W Foster |
2007-04-01 |
yhiD,
dctR,
slp,
hdeD,
hdeA
|
| 16397293 |
Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner |
2006-01-01 |
pmrR,
yfaS,
torI,
yaeP,
ykfH,
ykgO,
ylcG,
rzoD,
ybdZ,
cydX,
gnsA,
insA,
ymgF,
ymiA,
yciX,
rzoR,
ynfO,
yniD,
yobH,
yoeF,
yoeB,
yohO,
arnE,
ypdJ,
ypeB,
ypfN,
ypjJ,
arfA,
yheV,
ysaB,
sgcB,
yjhX,
ytjA,
yibT,
yicS,
yidD,
yifL,
ghoT,
yjjZ,
mntS,
iroK,
yifN,
wecF,
yigE,
blr,
yggP,
cpxP,
ygaY,
hdfR,
thiS,
yedN,
greB,
rtcA,
smf,
ygcU,
ypjK,
hokE,
sslE,
glcF,
glcE,
glvC,
yhaM,
tdcG,
ytfR,
yehH,
hokB,
ldrD,
hokA,
ldrA,
ldrB,
ecnA,
ecnB,
gapC,
yfjD,
yhdP,
yjjV,
cysW,
hokC,
ghxQ,
tatD,
yjdP,
cutC,
nirC,
frlC,
aroK,
gntU,
yedS,
dgoD,
dgoA,
dgoR,
yigL,
ldrC,
ylbE,
ydbJ,
yeiW,
yehK,
yaiX,
yoeA,
yneM
|
| 16738553 |
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi |
2006-01-01 |
pmrR,
torI,
yaeP,
ykfH,
ykgO,
ylcG,
rzoD,
ybdZ,
cydX,
gnsA,
insA,
ymgF,
ymiA,
yciX,
rzoR,
ynfO,
yniD,
yobH,
yoeB,
yohO,
arnE,
ypeB,
ypfN,
ypjJ,
arfA,
yheV,
ysaB,
sgcB,
yjhX,
ytjA,
yibT,
yicS,
yidD,
yifL,
ghoT,
yjjZ,
mntS,
iroK,
wecF,
yigE,
blr,
yggP,
cpxP,
hdfR,
thiS,
greB,
rtcA,
smf,
ygcU,
ypjK,
hokE,
sslE,
glcF,
glcE,
yhaM,
tdcG,
ytfR,
hokB,
ldrD,
hokA,
ldrA,
ldrB,
ecnA,
ecnB,
yfjD,
yhdP,
yjjV,
cysW,
hokC,
ghxQ,
tatD,
yjdP,
cutC,
nirC,
frlC,
aroK,
gntU,
dgoD,
dgoA,
dgoR,
yigL,
ldrC,
ylbE,
ydbJ,
yeiW,
yehK,
yneM,
ykfM,
ylcI,
yciY,
yncL,
ylcH,
ynhF,
yciZ,
ydgU,
ypfM,
ymgI,
ymgJ,
dinQ
|
| 15556475 |
Phylogenetic distribution of DNA-binding transcription factors in bacteria and archaea. Comput Biol Chem Ernesto Pérez-Rueda , Julio Collado-Vides , Lorenzo Segovia |
2004-12-01 |
dgoR,
rhmR,
sfsA,
ybhD,
yjjJ,
ykgA,
ecpR,
yagI,
yaiW,
rutR,
ybaO,
ydiP,
ybcM,
ydhB,
ybdO,
ybeF,
yahB,
ogrK,
ybhN,
perR,
ybiH,
ybjJ,
rcdA,
pspC,
ycaN,
rclR,
mltD,
bluR,
mqsA,
marR,
yciT,
ycjW,
puuR,
racR,
pgrR,
ydeM,
ydcN,
hicB,
ydcR,
mcbR,
yneJ,
rspR,
cspB,
ynfL,
nemR,
ygeH,
ydjF,
dmlR,
cspC,
yebK,
yedW,
yeeY,
murR,
yeaM,
yegW,
yeiE,
sgcR,
ypdC,
yfeC,
yggD,
yfeD,
yfeR,
yaiV,
eutR,
yfhH,
glrR,
yfiE,
ygaV,
hycA,
ygbI,
yfjR,
ygeV,
yqeI,
ygeK,
ygeR,
ygfI,
ycfQ,
ydfK,
yqhC,
yafC,
ttdR,
yhaJ,
yghO,
aaeR,
yheO,
frlR,
ibaG,
dctR,
yhjC,
yhjB,
yiaU,
yidF,
yidL,
yidP,
yidZ,
yieP,
yihL,
yihW,
frvR
|
| 14702398 |
GadE (YhiE): a novel activator involved in the response to acid environment in Escherichia coli. Microbiology (Reading, Engl.) Florence Hommais , Evelyne Krin , Jean-Yves Coppée , Céline Lacroix , Edouard Yeramian , Antoine Danchin , Philippe Bertin |
2004-01-01 | - |
| 12900028 |
Systematic characterization of Escherichia coli genes/ORFs affecting biofilm formation. FEMS Microbiol. Lett. Elizabeth Tenorio , Takashi Saeki , Katsutoshi Fujita , Madoka Kitakawa , Tomoya Baba , Hirotada Mori , Katsumi Isono |
2003-08-08 |
cydX,
ftsZ,
cfa,
ftsQ,
yafO,
hisJ,
ppdA,
ybjP,
pspC,
ycaO,
csgG,
csgF,
flgF,
flgL,
flgG,
yceG,
minE,
minD,
pgsA,
clsA,
rzpD,
ynbC,
dicB,
ydiJ,
sapD,
helD,
fdrA,
cheR,
pgl,
yfcS,
fliH,
zinT,
ydhJ,
hslJ,
wcaK,
wcaJ,
yegR,
yfcO,
ccmE,
ccmD,
evgS,
zipA,
rpmB,
bamC,
bepA,
pepP,
zapA,
queE,
flgI,
relE,
yfjT,
fis,
lptC,
secY,
gspA,
gspG,
damX,
ftsX,
nikE,
yhhH,
yhiI,
dctR,
hdeA,
waaC,
yiiQ,
malK,
mreB,
ytfJ,
ccmF,
yjhE,
dsdC,
borD,
prfA
|
| 12694615 |
Regulatory network of acid resistance genes in Escherichia coli. Mol. Microbiol. Nobuhisa Masuda , George M Church |
2003-05-01 | - |
| 排名 | 科研单位 | 文献 |
|---|---|---|
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| 排名 | 研究人员 | 文献 |
|---|---|---|
| {{authorIndex+1}} |
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