agaI - putative deaminase AgaI-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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947985 agaI

基因描述

Type	Description
Definition	putative deaminase AgaI

研究结论

Date	Results	Publications
2013-10-26 14:11:00	The agaI, nagB, and agaI nagB mutants were not affected in Aga and D-galactosamine utilization indicating that neither agaI nor nagB is involved in the deamination and isomerization of D-galactosamine-6-P.	23634833

名称对应

Type	IDs
Synonymous	ECK3129, yraG
Gene	UniProtKB-ID: AGAI_ECOLI UniprotKB: P42912 UniParc: UPI00001256A6 EMBL: AF228498, AP009048, U18997, U00096 EnsemblGenome: b3141, BAE77187 KO: eco:b3141, ecj:JW3110
Nucleutide sequences	EMBL-CDS: AAA57944.1, AAC76175.1, BAE77187.1, AAF81093.1 EnsemblGenome_TRS: AAC76175, BAE77187
Protein sequencees	EnsemblGenome_PRO: BAE77187, AAC76175 RefSeq: NP_417610.1
Others	UniRef100: UniRef100_P42912 UniRef90: UniRef90_P42912 UniRef50: UniRef50_P42912

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mRNA

Protein

UniprotKB

Description

Refseq

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Pubmed编号	文献信息	发表日期	相关基因
23634833	Genetic analysis of the roles of agaA, agaI, and agaS genes in the N-acetyl-D-galactosamine and D-galactosamine catabolic pathways in Escherichia coli strains O157:H7 and C. BMC Microbiol. Zonglin Hu , Isha R Patel , Amit Mukherjee	2013-01-01	agaS, agaA, agaI
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
16397293	Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner	2006-01-01	pmrR, yfaS, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeF, yoeB, yohO, arnE, ypdJ, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, yifN, wecF, yigE, blr, yggP, cpxP, ygaY, hdfR, thiS, yedN, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, glvC, yhaM, tdcG, ytfR, yehH, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, gapC, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, yedS, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yaiX, yoeA, yneM
16738553	Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi	2006-01-01	pmrR, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeB, yohO, arnE, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, wecF, yigE, blr, yggP, cpxP, hdfR, thiS, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, yhaM, tdcG, ytfR, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yneM, ykfM, ylcI, yciY, yncL, ylcH, ynhF, yciZ, ydgU, ypfM, ymgI, ymgJ, dinQ
12952533	An expanded genome-scale model of Escherichia coli K-12 (iJR904 GSM/GPR). Genome Biol. Jennifer L Reed , Thuy D Vo , Christophe H Schilling , Bernhard O Palsson	2003-01-01	kefF, glsB, sucC, sucD, ycaK, ydiO, aldA, betA, patD, feaB, ynbA, glsA, ydiF, fadK, ynjE, pfo, atoA, menD, ucpA, sseA, nadK, idnO, ydgJ, aas, mqsR, atoD, tdcD, kefG, yhhX, agaI, aldB, yibQ, waaH, yieK, pfkA, nudC, acs, ycjS, aidB, preA, preT, ygfK, yohF
11574054	A functional update of the Escherichia coli K-12 genome. Genome Biol. M H Serres , S Gopal , L A Nahum , P Liang , T Gaasterland , M Riley	2001-01-01	-
10931310	Pathways for the utilization of N-acetyl-galactosamine and galactosamine in Escherichia coli. Mol. Microbiol. A BrinkkÃ¶tter , H KlÃ¶ss , C Alpert , J W Lengeler	2000-07-01	-
9278503	The complete genome sequence of Escherichia coli K-12. Science F R Blattner , G Plunkett , C A Bloch , N T Perna , V Burland , M Riley , J Collado-Vides , J D Glasner , C K Rode , G F Mayhew , J Gregor , N W Davis , H A Kirkpatrick , M A Goeden , D J Rose , B Mau , Y Shao	1997-09-05	-
8932697	Novel phosphotransferase genes revealed by bacterial genome sequencing: a gene cluster encoding a putative N-acetylgalactosamine metabolic pathway in Escherichia coli. Microbiology (Reading) Jonathan Reizer , Tom M Ramseier , Aiala Reizer , Alain Charbit , Milton H Saier	1996-02-01	-

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