rtcB - RNA-splicing ligase-BMKCloudï½ç¾è¿å®¢äº

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947929 rtcB

基因描述

Type	Description
Definition	RNA-splicing ligase

研究结论

Date	Results	Publications
2017-09-16 10:52:00	our findings not only provide a physiological function for the RNA ligase RtcB in bacteria but highlight the reversibility of ribosome heterogeneity, a crucial but hitherto undescribed concept for translational regulation.	27789694
2012-07-14 11:23:00	Data show that RtcB seals broken RNAs with 3'-phosphate and 5'-OH ends.	22474365
2011-10-29 10:21:00	RtcB, a novel RNA ligase, can catalyze tRNA splicing and HAC1 mRNA splicing in vivo	21757685

名称对应

Type	IDs
Synonymous	ECK3407, yhgL
Gene	UniProtKB-ID: RTCB_ECOLI UniprotKB: P46850 UniParc: UPI00001352D1 EMBL: U00096, U18997, AP009048 EnsemblGenome: BAE77871, b3421 KO: ecj:JW3384, eco:b3421
Nucleutide sequences	EMBL-CDS: AAA58219.1, BAE77871.1, AAC76446.1 EnsemblGenome_TRS: BAE77871, AAC76446
Protein sequencees	EnsemblGenome_PRO: BAE77871, AAC76446 RefSeq: NP_417879.1
Others	UniRef100: UniRef100_P46850 UniRef90: UniRef90_P46850 UniRef50: UniRef50_P46850

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mRNA

Protein

UniprotKB

Description

Refseq

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全选

Pubmed编号	文献信息	发表日期	相关基因
27789694	The RNA ligase RtcB reverses MazF-induced ribosome heterogeneity in Escherichia coli. Nucleic Acids Res. Hannes Temmel , Christian MÃ¼ller , Martina Sauert , Oliver Vesper , Ariela Reiss , Johannes Popow , Javier Martinez , Isabella Moll	2017-05-05	-
24218597	Rewriting the rules for end joining via enzymatic splicing of DNA 3'-PO4 and 5'-OH ends. Proc. Natl. Acad. Sci. U.S.A. Ushati Das , Anupam K Chakravarty , Barbara S Remus , Stewart Shuman	2013-12-17	-
22474365	RNA ligase RtcB splices 3'-phosphate and 5'-OH ends via covalent RtcB-(histidinyl)-GMP and polynucleotide-(3')pp(5')G intermediates. Proc. Natl. Acad. Sci. U.S.A. Anupam K Chakravarty , Roman Subbotin , Brian T Chait , Stewart Shuman	2012-04-17	rtcB
21757685	RtcB, a novel RNA ligase, can catalyze tRNA splicing and HAC1 mRNA splicing in vivo. J Biol Chem Naoko Tanaka , Birthe Meineke , Stewart Shuman	2011-09-02	-
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
21224389	RtcB is the RNA ligase component of an Escherichia coli RNA repair operon. J Biol Chem Naoko Tanaka , Stewart Shuman	2011-03-11	-
16962548	Thermofluor-based high-throughput stability optimization of proteins for structural studies. Anal. Biochem. Ulrika B Ericsson , B Martin Hallberg , George T Detitta , Niek Dekker , PÃ¤r Nordlund	2006-10-15	yddE, panB, proC, rlmL, dmsD, rsmF, hisI, yeaD, nuoE, hemF, truD, yqjI, yhaK, rtcB, ubiD, hemG, dusA, hemD, miaA, msrA, ttcA
16606699	Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res Mohammad Arifuzzaman , Maki Maeda , Aya Itoh , Kensaku Nishikata , Chiharu Takita , Rintaro Saito , Takeshi Ara , Kenji Nakahigashi , Hsuan-Cheng Huang , Aki Hirai , Kohei Tsuzuki , Seira Nakamura , Mohammad Altaf-Ul-Amin , Taku Oshima , Tomoya Baba , Natsuko Yamamoto , Tomoyo Kawamura , Tomoko Ioka-Nakamichi , Masanari Kitagawa , Masaru Tomita , Shigehiko Kanaya , Chieko Wada , Hirotada Mori	2006-05-01	-
16397293	Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner	2006-01-01	pmrR, yfaS, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeF, yoeB, yohO, arnE, ypdJ, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, yifN, wecF, yigE, blr, yggP, cpxP, ygaY, hdfR, thiS, yedN, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, glvC, yhaM, tdcG, ytfR, yehH, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, gapC, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, yedS, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yaiX, yoeA, yneM
16738553	Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi	2006-01-01	pmrR, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeB, yohO, arnE, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, wecF, yigE, blr, yggP, cpxP, hdfR, thiS, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, yhaM, tdcG, ytfR, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yneM, ykfM, ylcI, yciY, yncL, ylcH, ynhF, yciZ, ydgU, ypfM, ymgI, ymgJ, dinQ

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