yhdE - nucleoside triphosphate pyrophosphatase YhdE-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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947753 yhdE

基因描述

Type	Description
Definition	nucleoside triphosphate pyrophosphatase YhdE

研究结论

Date	Results	Publications
2015-04-04 11:48:00	This study reveals the previously unknown involvement of YhdE in cell growth inhibition under stress conditions, cell-division arrest and cell-shape maintenance, highlighting YhdE's important role in E. coli cell-cycle checkpoints.	25658941

名称对应

Type	IDs
Synonymous	ECK3236
Gene	UniProtKB-ID: NTPPA_ECOLI UniprotKB: P25536 UniParc: UPI000013B1ED EMBL: AP009048, U18997, U00096, X57166 EnsemblGenome: BAE77290, b3248 KO: eco:b3248, ecj:JW3217
Nucleutide sequences	EMBL-CDS: AAA58051.1, AAC76280.1, BAE77290.1, CAA40456.1 EnsemblGenome_TRS: AAC76280, BAE77290
Protein sequencees	EnsemblGenome_PRO: AAC76280, BAE77290 RefSeq: NP_417714.1
Others	UniRef100: UniRef100_P25536 UniRef90: UniRef90_P25536 UniRef50: UniRef50_P25536

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mRNA

Protein

UniprotKB

Description

Refseq

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Pubmed编号	文献信息	发表日期	相关基因
28811554	A new method to investigate the catalytic mechanism of YhdE pyrophosphatase by using a pyrophosphate fluorescence probe. Sci Rep Qingya Shen , Hongwei Tan , Guo-Wen Xing , Jimin Zheng , Zongchao Jia	2017-08-15	-
25658941	Insights into the cellular function of YhdE, a nucleotide pyrophosphatase from Escherichia coli. PLoS ONE Jin Jin , Ruijuan Wu , Jia Zhu , Shaoyuan Yang , Zhen Lei , Nan Wang , Vinay K Singh , Jimin Zheng , Zongchao Jia	2015-01-01	-
24561554	The binary protein-protein interaction landscape of Escherichia coli. Nat. Biotechnol. Seesandra V Rajagopala , Patricia Sikorski , Ashwani Kumar , Roberto Mosca , James Vlasblom , Roland Arnold , Jonathan Franca-Koh , Suman B Pakala , Sadhna Phanse , Arnaud Ceol , Roman HÃ¤user , Gabriella Siszler , Stefan Wuchty , Andrew Emili , Mohan Babu , Patrick Aloy , Rembert Pieper , Peter Uetz	2014-03-01	-
24210219	Biochemical and structural studies of conserved Maf proteins revealed nucleotide pyrophosphatases with a preference for modified nucleotides. Chem. Biol. Anatoli Tchigvintsev , Dmitri Tchigvintsev , Robert Flick , Ana Popovic , Aiping Dong , Xiaohui Xu , Greg Brown , Wenyun Lu , Hong Wu , Hong Cui , Ludmila Dombrowski , Jeong Chan Joo , Natalia Beloglazova , Jinrong Min , Alexei Savchenko , Amy A Caudy , Joshua D Rabinowitz , Alexey G Murzin , Alexander F Yakunin	2013-11-21	-
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
17366475	From the genome sequence to the proteome and back: evaluation of E. coli genome annotation with a 2-D gel-based proteomics approach. Proteomics Isabelle Maillet , Peter Berndt , CÃ©line Malo , Sabrina Rodriguez , RenÃ© A Brunisholz , Zoltan Pragai , Sabine Arnold , Hanno Langen , Markus Wyss	2007-04-01	yjjV, yigL, ispH, yddE, can, yadG, sufD, yjjJ, hscA, galM, panC, ybbA, allE, rsfS, nagA, bioA, ybiT, gsiB, nfsA, serS, cmk, mukF, ycfP, cobB, minE, dadX, narL, tdk, ribC, add, ydjA, maeA, frsA, rspR, kdgR, rnt, thrS, pheS, ycgL, yeaG, rlmA, yebE, cmoA, uvrY, fliM, ribE, hisA, hisH, hisC, pfo, udk, yegQ, gatA, yegW, fruB, bglX, yfbU, yfcH, prmB, glk, pdxK, yfgM, iscS, wbbI, rpoE, tyrA, nhoA, ygdG, rlmC, queF, lysA, ygfF, thiL, zapA, yggS, rcsB, yghU, yghA, leuS, ybiX, ebgR, srlQ, yqjG, pnp, speB, ptsN, yhbJ, tldD, yhdE, yrdA, acuI, yheS, yhhX, ugpQ, ybeZ, ghrB, avtA, gmk, yidR
16397293	Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner	2006-01-01	pmrR, yfaS, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeF, yoeB, yohO, arnE, ypdJ, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, yifN, wecF, yigE, blr, yggP, cpxP, ygaY, hdfR, thiS, yedN, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, glvC, yhaM, tdcG, ytfR, yehH, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, gapC, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, yedS, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yaiX, yoeA, yneM
16738553	Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi	2006-01-01	pmrR, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeB, yohO, arnE, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, wecF, yigE, blr, yggP, cpxP, hdfR, thiS, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, yhaM, tdcG, ytfR, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yneM, ykfM, ylcI, yciY, yncL, ylcH, ynhF, yciZ, ydgU, ypfM, ymgI, ymgJ, dinQ
11574054	A functional update of the Escherichia coli K-12 genome. Genome Biol. M H Serres , S Gopal , L A Nahum , P Liang , T Gaasterland , M Riley	2001-01-01	-
10841541	Functional implications from crystal structures of the conserved Bacillus subtilis protein Maf with and without dUTP. Proc. Natl. Acad. Sci. U.S.A. G Minasov , M Teplova , G C Stewart , E V Koonin , W F Anderson , M Egli	2000-06-06	-

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