speE - spermidine synthase-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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947726 speE

基因描述

Type	Description
Definition	spermidine synthase

研究结论

Date	Results	Publications
2010-05-10 11:16:00	Crystal structure of E. coli SpeE reveals that it has a large and unique substrate-binding cleft that may account for its lower amine substrate specificity.	20051267
2007-11-05 21:38:00	N-terminus verified by Edman degradation on mature peptide	3526348

名称对应

Type	IDs
Synonymous	ECK0120
Gene	UniProtKB-ID: SPEE_ECOLI UniprotKB: P09158 UniParc: UPI0000168002 EMBL: U00096, AP009048, J02804 EnsemblGenome: b0121, BAB96695 KO: ecj:JW0117, eco:b0121
Nucleutide sequences	EMBL-CDS: AAA24643.1, AAC73232.1, BAB96695.1 EnsemblGenome_TRS: BAB96695, AAC73232
Protein sequencees	EnsemblGenome_PRO: AAC73232, BAB96695 RefSeq: NP_414663.1
Others	UniRef100: UniRef100_A7ZHL0 UniRef90: UniRef90_P66834 UniRef50: UniRef50_P66834

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mRNA

Protein

UniprotKB

Description

Refseq

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Location

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全选

Pubmed编号	文献信息	发表日期	相关基因
24561554	The binary protein-protein interaction landscape of Escherichia coli. Nat. Biotechnol. Seesandra V Rajagopala , Patricia Sikorski , Ashwani Kumar , Roberto Mosca , James Vlasblom , Roland Arnold , Jonathan Franca-Koh , Suman B Pakala , Sadhna Phanse , Arnaud Ceol , Roman HÃ¤user , Gabriella Siszler , Stefan Wuchty , Andrew Emili , Mohan Babu , Patrick Aloy , Rembert Pieper , Peter Uetz	2014-03-01	-
23001854	Site-directed mutations of the gatekeeping loop region affect the activity of Escherichia coli spermidine synthase. Mol. Biotechnol. Mon-Juan Lee , Ya-Ting Yang , Vivian Lin , Haimei Huang	2013-06-01	-
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
20051267	The crystal structure of Escherichia coli spermidine synthase SpeE reveals a unique substrate-binding pocket. J. Struct. Biol. Xingding Zhou , Teck Khiang Chua , Karolina L Tkaczuk , Janusz M Bujnicki , J Sivaraman	2010-03-01	speE
19542271	Polyamines are not required for aerobic growth of Escherichia coli: preparation of a strain with deletions in all of the genes for polyamine biosynthesis. J. Bacteriol. Manas K Chattopadhyay , Celia White Tabor , Herbert Tabor	2009-09-01	ldcC, speF, speA, speC, speB, speD, speE, cadA
18304323	Protein abundance profiling of the Escherichia coli cytosol. BMC Genomics Yasushi Ishihama , Thorsten Schmidt , Juri Rappsilber , Matthias Mann , F Ulrich Hartl , Michael J Kerner , Dmitrij Frishman	2008-01-01	-
17187058	Absolute protein expression profiling estimates the relative contributions of transcriptional and translational regulation. Nat. Biotechnol. Peng Lu , Christine Vogel , Rong Wang , Xin Yao , Edward M Marcotte	2007-01-01	sspA, talB, dnaK, dnaJ, rpsT, ileS, dapB, carB, ftsZ, murE, aceF, acpP, surA, secA, can, aceE, panB, argF, lpxA, dksA, lpd, erpA, skp, dapD, acnB, tsf, glnH, fabZ, metQ, accA, galM, sodB, panC, pyrH, codA, opgG, pepD, tauB, eno, proC, phoR, thiI, gpmA, leuC, tig, clpP, clpX, lon, adk, htpG, acrB, trpD, apt, ydgH, rplT, purK, ompT, thrC, ybeD, ahpC, purR, glf, serA, miaB, pgm, seqA, rfbB, iscR, asnB, mprA, fldA, fur, sucA, sucB, hisJ, glnS, sucC, sucD, gltA, bioB, pheT, bioD, metK, sdhA, ybiC, tolB, ybiT, ldtB, moeA, gsiB, yliE, ihfA, serS, pflB, serC, aroA, ihfB, rpsA, mukE
16858726	A complexomic study of Escherichia coli using two-dimensional blue native/SDS polyacrylamide gel electrophoresis. Electrophoresis Jean-Paul Lasserre , Emmanuelle Beyne , SlovÃ©nie Pyndiah , Delphine Lapaillerie , StÃ©phane Claverol , Marc Bonneu	2006-08-01	sspA, talB, dnaK, mog, dapB, aceF, acpP, gpt, secA, can, aceE, panB, mrcB, dksA, lpd, skp, dapD, tsf, bamA, fabZ, sodB, panC, yahK, frmA, codA, lacI, pepD, hemB, eno, proC, gpmA, tig, clpP, htpG, dps, acrB, apt, cmtB, rfbA, hybC, ahpC, pgm, rfbB, fur, sucA, osmE, sucC, sucD, gltA, cydA, galE, pheT, metK, moaB, exbB, moeA, rihA, serS, ycaC, pflB, yajG, msbA, rpsA, uxaB, aspC, ompA, hyaB, cbdA, opgH, yniC, deoD, pck, yagU, purB, galU, dhaK, fabD, prs, nfsB, narH, narG, kdsA, ybgI, hns, adhE, sohB, fabI, tpx, pspA, hybO, uspE, narZ, fdnG, gadC, gadB, copA, pyrG, poxB, pntB
16397293	Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner	2006-01-01	pmrR, yfaS, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeF, yoeB, yohO, arnE, ypdJ, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, yifN, wecF, yigE, blr, yggP, cpxP, ygaY, hdfR, thiS, yedN, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, glvC, yhaM, tdcG, ytfR, yehH, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, gapC, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, yedS, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yaiX, yoeA, yneM
16738553	Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi	2006-01-01	pmrR, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeB, yohO, arnE, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, wecF, yigE, blr, yggP, cpxP, hdfR, thiS, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, yhaM, tdcG, ytfR, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yneM, ykfM, ylcI, yciY, yncL, ylcH, ynhF, yciZ, ydgU, ypfM, ymgI, ymgJ, dinQ

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