rbfA - 30S ribosome binding factor-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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947685 rbfA

基因描述

Type	Description
Definition	30S ribosome binding factor

研究结论

Date	Results	Publications
2020-03-21 11:19:00	By gating the transition from 30S ribosome biogenesis to translation initiation, RbfA and IF3 maintain the fidelity of bacterial protein synthesis.	31728529
2015-08-08 10:35:00	Results shows that YjeQ promotes the release of RbfA through the C-terminal helix in its zinc-finger domain.	25904134
2013-08-31 11:12:00	Overexpression of RbfA in the absence of the KsgA results in impaired translation initiation.	23387871
2007-11-05 21:38:00	N-terminus verified by Edman degradation on mature peptide	9740056

名称对应

Type	IDs
Synonymous	ECK3156, sdr-43, yhbB
Gene	UniProtKB-ID: RBFA_ECOLI UniprotKB: P0A7G2 UniParc: UPI00001654F8 EMBL: AP009048, U00096, U18997, X13270, X13775 EnsemblGenome: BAE77213, b3167 KO: ecj:JW3136, eco:b3167
Nucleutide sequences	EMBL-CDS: BAE77213.1, CAA31634.1, AAA57970.1, CAA32020.1, AAC76201.1 EnsemblGenome_TRS: BAE77213, AAC76201
Protein sequencees	EnsemblGenome_PRO: BAE77213, AAC76201 RefSeq: NP_417636.1
Others	UniRef100: UniRef100_A7ZS64 UniRef90: UniRef90_A7ZS64 UniRef50: UniRef50_A0KNE2

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Pubmed编号	文献信息	发表日期	相关基因
31728529	RbfA and IF3 couple ribosome biogenesis and translation initiation to increase stress tolerance. Nucleic Acids Res. Indra Mani Sharma , Sarah A Woodson	2020-01-10	-
25904134	The C-terminal helix in the YjeQ zinc-finger domain catalyzes the release of RbfA during 30S ribosome subunit assembly. RNA Ajitha Jeganathan , Aida Razi , Brett Thurlow , Joaquin Ortega	2015-06-01	rbfA, rsgA
23387871	Overexpression of RbfA in the absence of the KsgA checkpoint results in impaired translation initiation. Mol. Microbiol. Keith Connolly , Gloria Culver	2013-03-01	rsmA, rbfA
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
18824089	Systems based mapping demonstrates that recovery from alkylation damage requires DNA repair, RNA processing, and translation associated networks. Genomics John P Rooney , Ajish D George , Ashish Patil , Ulrike Begley , Erin Bessette , Maria R Zappala , Xin Huang , Douglas S Conklin , Richard P Cunningham , Thomas J Begley	2009-01-01	blr, aroK, yaiT, dnaK, rpsT, ais, dcuC, cynR, clpX, tfaD, stfR, ahpC, ubiF, ybgK, ybhH, ybhR, gsiD, potH, ybjO, rplY, hflD, minC, oppD, ybgI, ydaS, ydaT, rzpD, ydeM, ydcS, ddpF, bdm, ddpA, uidR, rnt, slyA, ruvA, ruvB, ruvC, yecN, fliO, hisB, alkB, ada, mnmC, pdxH, yfdQ, cysA, yaiS, recO, recN, yciF, recA, recB, recC, smpB, prfB, alkA, argO, ycjR, yggL, parC, dnaG, rpsU, marA, pnp, deaD, rbfA, rpsO, glmM, fis, arcB, dam, gph, mtlA, pstB, atpF, mnmG, xerC, yihX, cpxA, tpiA, yiiS, priA, oxyR, rplA, mtn, cadC, epmA, hfq, ytfA, holC, dnaT, arcA, yjjY, cydD, symE, gmhA
18304323	Protein abundance profiling of the Escherichia coli cytosol. BMC Genomics Yasushi Ishihama , Thorsten Schmidt , Juri Rappsilber , Matthias Mann , F Ulrich Hartl , Michael J Kerner , Dmitrij Frishman	2008-01-01	-
17543954	Genome-wide screening of genes affecting glycogen metabolism in Escherichia coli K-12. FEBS Lett. Gustavo Eydallin , Alejandro M Viale , MarÃa Teresa MorÃ¡n-Zorzano , Francisco JosÃ© MuÃ±oz , Manuel Montero , Edurne Baroja-FernÃ¡ndez , Javier Pozueta-Romero	2007-06-26	cysW, glnD, phoB, nusB, clpP, lon, serA, pgm, serC, phoP, galU, yciU, yciT, ydcS, ynfA, rnt, phoQ, cspC, dsbB, mgrB, nudB, pgl, ubiG, cysK, cysU, cysP, cysA, mdtH, purC, iscU, iscS, nlpD, proW, fdx, rpoS, cysD, cysN, cysI, cysJ, ygdD, yqgB, rbfA, greA, rpoN, lptB, rpmJ, cysG, glgP, glgA, glgB, glgX, glgC, cysE, pyrE, pstS, pstC, pstA, rfaH, dsbA, purH, hfq, miaA, rpsF, mgtA, serB
16606699	Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res Mohammad Arifuzzaman , Maki Maeda , Aya Itoh , Kensaku Nishikata , Chiharu Takita , Rintaro Saito , Takeshi Ara , Kenji Nakahigashi , Hsuan-Cheng Huang , Aki Hirai , Kohei Tsuzuki , Seira Nakamura , Mohammad Altaf-Ul-Amin , Taku Oshima , Tomoya Baba , Natsuko Yamamoto , Tomoyo Kawamura , Tomoko Ioka-Nakamichi , Masanari Kitagawa , Masaru Tomita , Shigehiko Kanaya , Chieko Wada , Hirotada Mori	2006-05-01	-
16738553	Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi	2006-01-01	pmrR, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeB, yohO, arnE, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, wecF, yigE, blr, yggP, cpxP, hdfR, thiS, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, yhaM, tdcG, ytfR, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yneM, ykfM, ylcI, yciY, yncL, ylcH, ynhF, yciZ, ydgU, ypfM, ymgI, ymgJ, dinQ
16397293	Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner	2006-01-01	pmrR, yfaS, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeF, yoeB, yohO, arnE, ypdJ, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, yifN, wecF, yigE, blr, yggP, cpxP, ygaY, hdfR, thiS, yedN, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, glvC, yhaM, tdcG, ytfR, yehH, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, gapC, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, yedS, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yaiX, yoeA, yneM

研究热度

发表文献
研究结论

热点单位

排名	科研单位	文献
1	Department of Biochemistry, Robert Wood Johnson Medical School, 675 Hoes Lane, Piscataway, NJ 08854, USA.	2
2	Umeå University	2
3	University of Wisconsin-Madison	1
4	Nara Institute of Science and Technology	1
5	Josephine Bay Paul Center, Marine Biological Laboratory, Woods Hole, MA 02543, USA. mriley@mbl.edu	1

热点人员

排名	研究人员	文献
1	Masayori Inouye	4
2	Hirotada Mori	3
3	Tomoya Baba	2
4	Takashi Horiuchi	2
5	Barry L Wanner	2

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