| Type | Description |
|---|---|
| Definition | 30S ribosome binding factor |
| Date | Results | Publications |
|---|---|---|
| 2020-03-21 11:19:00 | By gating the transition from 30S ribosome biogenesis to translation initiation, RbfA and IF3 maintain the fidelity of bacterial protein synthesis. | 31728529 |
| 2015-08-08 10:35:00 | Results shows that YjeQ promotes the release of RbfA through the C-terminal helix in its zinc-finger domain. | 25904134 |
| 2013-08-31 11:12:00 | Overexpression of RbfA in the absence of the KsgA results in impaired translation initiation. | 23387871 |
| 2007-11-05 21:38:00 | N-terminus verified by Edman degradation on mature peptide | 9740056 |
| Type | IDs |
|---|---|
| Synonymous | ECK3156, sdr-43, yhbB |
| Gene |
UniProtKB-ID:
RBFA_ECOLI
UniprotKB:
P0A7G2
UniParc:
UPI00001654F8
EMBL:
AP009048,
U00096,
U18997,
X13270,
X13775
EnsemblGenome:
BAE77213,
b3167
KO:
ecj:JW3136,
eco:b3167
|
| Nucleutide sequences |
EMBL-CDS:
BAE77213.1,
CAA31634.1,
AAA57970.1,
CAA32020.1,
AAC76201.1
EnsemblGenome_TRS:
BAE77213,
AAC76201
|
| Protein sequencees |
EnsemblGenome_PRO:
BAE77213,
AAC76201
RefSeq:
NP_417636.1
|
| Others |
UniRef100:
UniRef100_A7ZS64
UniRef90:
UniRef90_A7ZS64
UniRef50:
UniRef50_A0KNE2
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
{{protein.nucleotideVersion}}
Ensembl: {{protein.nucleotideEnsembl}} |
{{protein.proteinVersion}}
Ensembl: {{protein.proteinEnsembl}} |
{{uniprot}} , |
Definition: {{{protein.definition}}}Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}} |
||||
| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
||||
暂无数据
| Pubmed编号 | 文献信息 | 发表日期 | 相关基因 |
|---|---|---|---|
| 31728529 |
RbfA and IF3 couple ribosome biogenesis and translation initiation to increase stress tolerance. Nucleic Acids Res. Indra Mani Sharma , Sarah A Woodson |
2020-01-10 | - |
| 25904134 |
RNA Ajitha Jeganathan , Aida Razi , Brett Thurlow , Joaquin Ortega |
2015-06-01 |
rbfA,
rsgA
|
| 23387871 |
Mol. Microbiol. Keith Connolly , Gloria Culver |
2013-03-01 |
rsmA,
rbfA
|
| 21873635 |
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas |
2011-09-01 | - |
| 18824089 |
Genomics John P Rooney , Ajish D George , Ashish Patil , Ulrike Begley , Erin Bessette , Maria R Zappala , Xin Huang , Douglas S Conklin , Richard P Cunningham , Thomas J Begley |
2009-01-01 |
blr,
aroK,
yaiT,
dnaK,
rpsT,
ais,
dcuC,
cynR,
clpX,
tfaD,
stfR,
ahpC,
ubiF,
ybgK,
ybhH,
ybhR,
gsiD,
potH,
ybjO,
rplY,
hflD,
minC,
oppD,
ybgI,
ydaS,
ydaT,
rzpD,
ydeM,
ydcS,
ddpF,
bdm,
ddpA,
uidR,
rnt,
slyA,
ruvA,
ruvB,
ruvC,
yecN,
fliO,
hisB,
alkB,
ada,
mnmC,
pdxH,
yfdQ,
cysA,
yaiS,
recO,
recN,
yciF,
recA,
recB,
recC,
smpB,
prfB,
alkA,
argO,
ycjR,
yggL,
parC,
dnaG,
rpsU,
marA,
pnp,
deaD,
rbfA,
rpsO,
glmM,
fis,
arcB,
dam,
gph,
mtlA,
pstB,
atpF,
mnmG,
xerC,
yihX,
cpxA,
tpiA,
yiiS,
priA,
oxyR,
rplA,
mtn,
cadC,
epmA,
hfq,
ytfA,
holC,
dnaT,
arcA,
yjjY,
cydD,
symE,
gmhA
|
| 18304323 |
Protein abundance profiling of the Escherichia coli cytosol. BMC Genomics Yasushi Ishihama , Thorsten Schmidt , Juri Rappsilber , Matthias Mann , F Ulrich Hartl , Michael J Kerner , Dmitrij Frishman |
2008-01-01 | - |
| 17543954 |
Genome-wide screening of genes affecting glycogen metabolism in Escherichia coli K-12. FEBS Lett. Gustavo Eydallin , Alejandro M Viale , MarÃa Teresa Morán-Zorzano , Francisco José Muñoz , Manuel Montero , Edurne Baroja-Fernández , Javier Pozueta-Romero |
2007-06-26 |
cysW,
glnD,
phoB,
nusB,
clpP,
lon,
serA,
pgm,
serC,
phoP,
galU,
yciU,
yciT,
ydcS,
ynfA,
rnt,
phoQ,
cspC,
dsbB,
mgrB,
nudB,
pgl,
ubiG,
cysK,
cysU,
cysP,
cysA,
mdtH,
purC,
iscU,
iscS,
nlpD,
proW,
fdx,
rpoS,
cysD,
cysN,
cysI,
cysJ,
ygdD,
yqgB,
rbfA,
greA,
rpoN,
lptB,
rpmJ,
cysG,
glgP,
glgA,
glgB,
glgX,
glgC,
cysE,
pyrE,
pstS,
pstC,
pstA,
rfaH,
dsbA,
purH,
hfq,
miaA,
rpsF,
mgtA,
serB
|
| 16606699 |
Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res Mohammad Arifuzzaman , Maki Maeda , Aya Itoh , Kensaku Nishikata , Chiharu Takita , Rintaro Saito , Takeshi Ara , Kenji Nakahigashi , Hsuan-Cheng Huang , Aki Hirai , Kohei Tsuzuki , Seira Nakamura , Mohammad Altaf-Ul-Amin , Taku Oshima , Tomoya Baba , Natsuko Yamamoto , Tomoyo Kawamura , Tomoko Ioka-Nakamichi , Masanari Kitagawa , Masaru Tomita , Shigehiko Kanaya , Chieko Wada , Hirotada Mori |
2006-05-01 | - |
| 16738553 |
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi |
2006-01-01 |
pmrR,
torI,
yaeP,
ykfH,
ykgO,
ylcG,
rzoD,
ybdZ,
cydX,
gnsA,
insA,
ymgF,
ymiA,
yciX,
rzoR,
ynfO,
yniD,
yobH,
yoeB,
yohO,
arnE,
ypeB,
ypfN,
ypjJ,
arfA,
yheV,
ysaB,
sgcB,
yjhX,
ytjA,
yibT,
yicS,
yidD,
yifL,
ghoT,
yjjZ,
mntS,
iroK,
wecF,
yigE,
blr,
yggP,
cpxP,
hdfR,
thiS,
greB,
rtcA,
smf,
ygcU,
ypjK,
hokE,
sslE,
glcF,
glcE,
yhaM,
tdcG,
ytfR,
hokB,
ldrD,
hokA,
ldrA,
ldrB,
ecnA,
ecnB,
yfjD,
yhdP,
yjjV,
cysW,
hokC,
ghxQ,
tatD,
yjdP,
cutC,
nirC,
frlC,
aroK,
gntU,
dgoD,
dgoA,
dgoR,
yigL,
ldrC,
ylbE,
ydbJ,
yeiW,
yehK,
yneM,
ykfM,
ylcI,
yciY,
yncL,
ylcH,
ynhF,
yciZ,
ydgU,
ypfM,
ymgI,
ymgJ,
dinQ
|
| 16397293 |
Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner |
2006-01-01 |
pmrR,
yfaS,
torI,
yaeP,
ykfH,
ykgO,
ylcG,
rzoD,
ybdZ,
cydX,
gnsA,
insA,
ymgF,
ymiA,
yciX,
rzoR,
ynfO,
yniD,
yobH,
yoeF,
yoeB,
yohO,
arnE,
ypdJ,
ypeB,
ypfN,
ypjJ,
arfA,
yheV,
ysaB,
sgcB,
yjhX,
ytjA,
yibT,
yicS,
yidD,
yifL,
ghoT,
yjjZ,
mntS,
iroK,
yifN,
wecF,
yigE,
blr,
yggP,
cpxP,
ygaY,
hdfR,
thiS,
yedN,
greB,
rtcA,
smf,
ygcU,
ypjK,
hokE,
sslE,
glcF,
glcE,
glvC,
yhaM,
tdcG,
ytfR,
yehH,
hokB,
ldrD,
hokA,
ldrA,
ldrB,
ecnA,
ecnB,
gapC,
yfjD,
yhdP,
yjjV,
cysW,
hokC,
ghxQ,
tatD,
yjdP,
cutC,
nirC,
frlC,
aroK,
gntU,
yedS,
dgoD,
dgoA,
dgoR,
yigL,
ldrC,
ylbE,
ydbJ,
yeiW,
yehK,
yaiX,
yoeA,
yneM
|
| 排名 | 科研单位 | 文献 |
|---|---|---|
| {{affIndex+1}} |
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| 排名 | 研究人员 | 文献 |
|---|---|---|
| {{authorIndex+1}} |
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