rlmG - 23S rRNA m(2)G1835 methyltransferase-BMKCloudï½ç¾è¿å®¢äº

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947589 rlmG

基因描述

Type	Description
Definition	23S rRNA m(2)G1835 methyltransferase

研究结论

Date	Results	Publications
2012-07-28 11:33:00	It was show that RsmD possesses superior binding properties toward the unmodified 30S subunit but is unable to bind a 30S subunit modified at G966. RsmD is unusual in its ability to withstand multiple amino acid substitutions of the active site.	22535590

名称对应

Type	IDs
Synonymous	ECK3074, ygjO
Gene	UniProtKB-ID: RLMG_ECOLI UniprotKB: P42596 UniParc: UPI0000135206 EMBL: AP009048, U00096, U18997 EnsemblGenome: b3084, BAE77134 KO: eco:b3084, ecj:JW5513
Nucleutide sequences	EMBL-CDS: BAE77134.1, AAC76119.2, AAA57885.1 EnsemblGenome_TRS: AAC76119, BAE77134
Protein sequencees	EnsemblGenome_PRO: AAC76119, BAE77134 RefSeq: NP_417555.4
Others	UniRef100: UniRef100_B1XG88 UniRef90: UniRef90_Q8XAK8 UniRef50: UniRef50_Q8XAK8

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mRNA

Protein

UniprotKB

Description

Refseq

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Pubmed编号	文献信息	发表日期	相关基因
24561554	The binary protein-protein interaction landscape of Escherichia coli. Nat. Biotechnol. Seesandra V Rajagopala , Patricia Sikorski , Ashwani Kumar , Roberto Mosca , James Vlasblom , Roland Arnold , Jonathan Franca-Koh , Suman B Pakala , Sadhna Phanse , Arnaud Ceol , Roman HÃ¤user , Gabriella Siszler , Stefan Wuchty , Andrew Emili , Mohan Babu , Patrick Aloy , Rembert Pieper , Peter Uetz	2014-03-01	-
22535590	Properties of small rRNA methyltransferase RsmD: mutational and kinetic study. RNA Olga V Sergeeva , Irina V Prokhorova , Yerdos Ordabaev , Philipp O Tsvetkov , Petr V Sergiev , Alexey A Bogdanov , Alexander A Makarov , Olga A Dontsova	2012-06-01	rlmG
18288206	Role of 16S ribosomal RNA methylations in translation initiation in Escherichia coli. EMBO J Gautam Das , Dinesh Kumar Thotala , Suman Kapoor , Sheelarani Karunanithi , Suman S Thakur , N Sadananda Singh , Umesh Varshney	2008-03-19	-
17389639	Ribosomal RNA guanine-(N2)-methyltransferases and their targets. Nucleic Acids Res. Petr V Sergiev , Alexey A Bogdanov , Olga A Dontsova	2007-01-01	rlmL, rlmG, rsmD, rrsA, rrlA, rsmC
17010380	Identification of Escherichia coli m2G methyltransferases: II. The ygjO gene encodes a methyltransferase specific for G1835 of the 23 S rRNA. J. Mol. Biol. Petr V Sergiev , Dmitry V Lesnyak , Alexey A Bogdanov , Olga A Dontsova	2006-11-17	rlmG
16738553	Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi	2006-01-01	pmrR, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeB, yohO, arnE, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, wecF, yigE, blr, yggP, cpxP, hdfR, thiS, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, yhaM, tdcG, ytfR, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yneM, ykfM, ylcI, yciY, yncL, ylcH, ynhF, yciZ, ydgU, ypfM, ymgI, ymgJ, dinQ
16397293	Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner	2006-01-01	pmrR, yfaS, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeF, yoeB, yohO, arnE, ypdJ, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, yifN, wecF, yigE, blr, yggP, cpxP, ygaY, hdfR, thiS, yedN, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, glvC, yhaM, tdcG, ytfR, yehH, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, gapC, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, yedS, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yaiX, yoeA, yneM
11929612	RNA:(guanine-N2) methyltransferases RsmC/RsmD and their homologs revisited--bioinformatic analysis and prediction of the active site based on the uncharacterized Mj0882 protein structure. BMC Bioinformatics Janusz M Bujnicki , Leszek Rychlewski	2002-04-03	rlmF, rlmG, rsmB, rsmC
11917006	Comparative genomics and evolution of proteins involved in RNA metabolism. Nucleic Acids Res. Vivek Anantharaman , Eugene V Koonin , L Aravind	2002-04-01	-
11053259	Phylogenomic analysis of 16S rRNA:(guanine-N2) methyltransferases suggests new family members and reveals highly conserved motifs and a domain structure similar to other nucleic acid amino-methyltransferases. FASEB J. J M Bujnicki	2000-11-01	rlmG, rsmC

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