dtpD - dipeptide:H(+) symporter DtpD-BMKCloudï½ç¾è¿å®¢äº

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947368 dtpD

基因描述

Type	Description
Definition	dipeptide:H(+) symporter DtpD

研究结论

Date	Results	Publications
2010-01-21 00:00:00	Uptake experiments indicated that DtpD (YbgH) functions as a canonical peptide transporter and is, therefore, a valid model for structural studies of this family of proteins.	19782088

名称对应

Type	IDs
Synonymous	ECK0698, ybgH
Gene	UniProtKB-ID: DTPD_ECOLI UniprotKB: P75742 UniParc: UPI000013A333 EMBL: AP009048, U00096 EnsemblGenome: b0709, BAA35368 KO: eco:b0709, ecj:JW0699
Nucleutide sequences	EMBL-CDS: BAA35368.1, AAC73803.1 EnsemblGenome_TRS: BAA35368, AAC73803
Protein sequencees	EnsemblGenome_PRO: BAA35368, AAC73803 RefSeq: NP_415237.1
Others	UniRef100: UniRef100_P75742 UniRef90: UniRef90_P75742 UniRef50: UniRef50_P39276

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mRNA

Protein

UniprotKB

Description

Refseq

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Location

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Pubmed编号	文献信息	发表日期	相关基因
25066136	Crystal structure of the E. coli peptide transporter YbgH. Structure Yan Zhao , Guotao Mao , Min Liu , Laixing Zhang , Xianping Wang , Xuejun C Zhang	2014-08-05	-
24561554	The binary protein-protein interaction landscape of Escherichia coli. Nat. Biotechnol. Seesandra V Rajagopala , Patricia Sikorski , Ashwani Kumar , Roberto Mosca , James Vlasblom , Roland Arnold , Jonathan Franca-Koh , Suman B Pakala , Sadhna Phanse , Arnaud Ceol , Roman HÃ¤user , Gabriella Siszler , Stefan Wuchty , Andrew Emili , Mohan Babu , Patrick Aloy , Rembert Pieper , Peter Uetz	2014-03-01	-
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
19782088	Projection structure of DtpD (YbgH), a prokaryotic member of the peptide transporter family. J. Mol. Biol. Fabio Casagrande , Daniel Harder , Andreas Schenk , Marcel Meury , Zohre Ucurum , Andreas Engel , Dietmar Weitz , Hannelore Daniel , Dimitrios Fotiadis	2009-12-11	dtpD, dtpC
18485005	DtpB (YhiP) and DtpA (TppB, YdgR) are prototypical proton-dependent peptide transporters of Escherichia coli. FEBS J. Daniel Harder , JÃ¼rgen Stolz , Fabio Casagrande , Petr Obrdlik , Dietmar Weitz , Dimitrios Fotiadis , Hannelore Daniel	2008-07-01	dtpD, dtpA, dtpB, dtpC
16842212	Microbial drug efflux proteins of the major facilitator superfamily. Curr Drug Targets Massoud Saidijam , Giulia Benedetti , Qinghu Ren , Zhiqiang Xu , Christopher J Hoyle , Sarah L Palmer , Alison Ward , Kim E Bettaney , Gerda Szakonyi , Johan Meuller , Scott Morrison , Martin K Pos , Patrick Butaye , Karl Walravens , Kate Langton , Richard B Herbert , Ronald A Skurray , Ian T Paulsen , John O'reilly , Nicholas G Rutherford , Melissa H Brown , Roslyn M Bill , Peter J F Henderson	2006-07-01	-
16738553	Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi	2006-01-01	pmrR, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeB, yohO, arnE, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, wecF, yigE, blr, yggP, cpxP, hdfR, thiS, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, yhaM, tdcG, ytfR, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yneM, ykfM, ylcI, yciY, yncL, ylcH, ynhF, yciZ, ydgU, ypfM, ymgI, ymgJ, dinQ
16381841	TCDB: the Transporter Classification Database for membrane transport protein analyses and information. Nucleic Acids Res. Milton H Saier , Can V Tran , Ravi D Barabote	2006-01-01	ygaY, ecnB, cysW, hokC, nirC, dnaK, nhaA, caiT, yaaU, kefF, kefC, thiP, thiQ, satP, setA, ydfJ, bcr, uidC, secA, nhaB, fhuA, glnH, caiC, metQ, metI, metN, cyoD, phoE, yagG, yahN, codB, mhpT, dcuC, pal, lptD, tauC, tauB, tauA, yajR, cyoE, betT, cyoA, amtB, ftsK, acrB, acrA, fsr, mscK, nuoN, fetB, macB, wbbH, cusF, cusB, cusA, fepA, pheP, fepC, fepG, cstA, fepD, tatE, mrdB, fhuC, gltL, ynfF, nagE, tolR, chbB, zitB, mngA, modB, modC, modA, yajC, ybhL, lsrB, exbB, potE, tolB, glnQ, gltJ, mdfA, gsiA, gsiB, gsiC, gsiD, acrD, ybjJ, potH, potG, potF, potI, artP, aqpZ, dmsC, cydC, dmsB, dmsA
16397293	Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner	2006-01-01	pmrR, yfaS, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeF, yoeB, yohO, arnE, ypdJ, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, yifN, wecF, yigE, blr, yggP, cpxP, ygaY, hdfR, thiS, yedN, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, glvC, yhaM, tdcG, ytfR, yehH, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, gapC, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, yedS, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yaiX, yoeA, yneM
16120447	Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. J. Mol. Biol. Erik Granseth , Daniel O Daley , Mikaela Rapp , Karin MelÃ©n , Gunnar von Heijne	2005-09-23	arnE, ygaY, glvC, yfjD, cysW, ghxQ, nirC, gntU, yrdE, nhaA, yaaU, kefC, yabI, satP, setA, lspA, yfdC, ydfJ, bcr, mraY, wzzE, gcd, yadH, cdsA, metI, cyoD, yciS, yagG, yahN, rclC, codB, mhpT, pqiA, dcuC, tauC, yqeG, gfcA, brnQ, phoR, proY, cvpA, yajR, cyoE, cyoA, amtB, mdlB, mdlA, ygaZ, ftsK, acrB, fsr, ybbJ, ybbY, mscK, nuoN, fetB, ybbW, ybcI, ydgC, ydgI, fepE, cusA, yedE, pheP, fepG, cstA, fepD, yaiY, citA, mrdB, sapC, arnC, nagE, hyfE, aer, sdhC, sdhD, lptG, cydA, arnF, cydB, zitB, pnuC, mngA, opgE, modB, ybaT, ybhI, yifK, ybhL, ybhR, ybhQ, ybhN, ybhS, yqaA, exbB, potE, ybiR, gltJ

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