| Type | Description |
|---|---|
| Definition | 23S rRNA 2'-O-ribose C2498 methyltransferase |
| Date | Results | Publications |
|---|---|---|
| 2014-01-11 11:08:00 | Purification and crystallization of RlmM from Escherichia coli is described. | 23722841 |
| 2013-01-26 11:15:00 | Authors have solved the crystal structure of E. coli RlmM and its complex with AdoMet and demonstrated RlmM activity on in vitro-transcribed rRNA. | 22923526 |
| 2010-01-21 00:00:00 | YgdE is the 2'-O-methyltransferase responsible for modifying 23S rRNA nucleotide C2498, and that modification occurs before assembly of the 50S ribosomal subunit. | 19400805 |
| Type | IDs |
|---|---|
| Synonymous | ECK2801, ygdE |
| Gene |
UniProtKB-ID:
RLMM_ECOLI
UniprotKB:
P0ADR6
UniParc:
UPI000013B051
EMBL:
U00096,
AP009048,
X73413,
U29581
EnsemblGenome:
b2806,
BAE76878
KO:
ecj:JW2777,
eco:b2806
|
| Nucleutide sequences |
EMBL-CDS:
AAC75848.1,
CAA51815.1,
BAE76878.1,
AAB40456.1
Gene_ORFName:
b1976
EnsemblGenome_TRS:
BAE76878,
AAC75848
|
| Protein sequencees |
EnsemblGenome_PRO:
AAC75848,
BAE76878
RefSeq:
NP_417286.1
|
| Others |
UniRef100:
UniRef100_A7ZQQ1
UniRef90:
UniRef90_Q32CB2
UniRef50:
UniRef50_P45100
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
{{protein.nucleotideVersion}}
Ensembl: {{protein.nucleotideEnsembl}} |
{{protein.proteinVersion}}
Ensembl: {{protein.proteinEnsembl}} |
{{uniprot}} , |
Definition: {{{protein.definition}}}Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}} |
||||
| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
||||
暂无数据
| Pubmed编号 | 文献信息 | 发表日期 | 相关基因 |
|---|---|---|---|
| 23722841 |
Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun. Hong Yue Guo , Zeng Qiang Gao , Heng Zhang , Yong Wei , Jian Hua Xu , Wen Ya Wang , Ai Xia Yan , Yu Hui Dong |
2013-06-01 | - |
| 22923526 |
Crystal structure of RlmM, the 2'O-ribose methyltransferase for C2498 of Escherichia coli 23S rRNA. Nucleic Acids Res. Avinash S Punekar , Tyson R Shepherd , Josefine Liljeruhm , Anthony C Forster , Maria Selmer |
2012-11-01 |
rlmM
|
| 19400805 |
YgdE is the 2'-O-ribose methyltransferase RlmM specific for nucleotide C2498 in bacterial 23S rRNA. Mol. Microbiol. Elzbieta Purta , Michelle O'Connor , Janusz M Bujnicki , Stephen Douthwaite |
2009-06-01 |
rlmD,
rlmC,
rlmM
|
| 16849790 |
Microbiology (Reading, Engl.) Lauren M Junker , Joseph E Peters , Anthony G Hay |
2006-08-01 |
ygaY,
glvC,
ytfR,
nirC,
aroK,
yjhR,
sspA,
folA,
setA,
secM,
lpxB,
glnD,
yafJ,
insH1,
ykfJ,
insH1,
panC,
yahJ,
renD,
yajQ,
priC,
leuC,
betT,
dps,
fsr,
ybbJ,
ydgI,
fau,
quuD,
fepG,
ybdH,
cmtA,
iscR,
ddlA,
ybgD,
chbB,
yagN,
ybhJ,
ybiH,
ybiT,
ybiY,
nanR,
ybjO,
ycaN,
ycaP,
ycbU,
hspQ,
pgaA,
cyoB,
ycdZ,
mdtG,
yceH,
ptsG,
ycjM,
holB,
lolE,
cspD,
pspF,
icd,
btuR,
yagL,
rnb,
insH1,
hybO,
recE,
feaB,
insH1,
ydcU,
ddpD,
ddpC,
narV,
narW,
ydfG,
ynfL,
mmuM,
insH1,
rstA,
ycgL,
ydjG,
cheW,
araF,
insH1,
yeeP,
insH1,
wcaJ,
yehE,
yehC,
yehA,
fruA,
osmF,
glpT,
menC,
cynX,
flk,
uxuB,
accD,
mnmC,
yfcR,
emrY
|
| 16738553 |
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi |
2006-01-01 |
pmrR,
torI,
yaeP,
ykfH,
ykgO,
ylcG,
rzoD,
ybdZ,
cydX,
gnsA,
insA,
ymgF,
ymiA,
yciX,
rzoR,
ynfO,
yniD,
yobH,
yoeB,
yohO,
arnE,
ypeB,
ypfN,
ypjJ,
arfA,
yheV,
ysaB,
sgcB,
yjhX,
ytjA,
yibT,
yicS,
yidD,
yifL,
ghoT,
yjjZ,
mntS,
iroK,
wecF,
yigE,
blr,
yggP,
cpxP,
hdfR,
thiS,
greB,
rtcA,
smf,
ygcU,
ypjK,
hokE,
sslE,
glcF,
glcE,
yhaM,
tdcG,
ytfR,
hokB,
ldrD,
hokA,
ldrA,
ldrB,
ecnA,
ecnB,
yfjD,
yhdP,
yjjV,
cysW,
hokC,
ghxQ,
tatD,
yjdP,
cutC,
nirC,
frlC,
aroK,
gntU,
dgoD,
dgoA,
dgoR,
yigL,
ldrC,
ylbE,
ydbJ,
yeiW,
yehK,
yneM,
ykfM,
ylcI,
yciY,
yncL,
ylcH,
ynhF,
yciZ,
ydgU,
ypfM,
ymgI,
ymgJ,
dinQ
|
| 16397293 |
Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner |
2006-01-01 |
pmrR,
yfaS,
torI,
yaeP,
ykfH,
ykgO,
ylcG,
rzoD,
ybdZ,
cydX,
gnsA,
insA,
ymgF,
ymiA,
yciX,
rzoR,
ynfO,
yniD,
yobH,
yoeF,
yoeB,
yohO,
arnE,
ypdJ,
ypeB,
ypfN,
ypjJ,
arfA,
yheV,
ysaB,
sgcB,
yjhX,
ytjA,
yibT,
yicS,
yidD,
yifL,
ghoT,
yjjZ,
mntS,
iroK,
yifN,
wecF,
yigE,
blr,
yggP,
cpxP,
ygaY,
hdfR,
thiS,
yedN,
greB,
rtcA,
smf,
ygcU,
ypjK,
hokE,
sslE,
glcF,
glcE,
glvC,
yhaM,
tdcG,
ytfR,
yehH,
hokB,
ldrD,
hokA,
ldrA,
ldrB,
ecnA,
ecnB,
gapC,
yfjD,
yhdP,
yjjV,
cysW,
hokC,
ghxQ,
tatD,
yjdP,
cutC,
nirC,
frlC,
aroK,
gntU,
yedS,
dgoD,
dgoA,
dgoR,
yigL,
ldrC,
ylbE,
ydbJ,
yeiW,
yehK,
yaiX,
yoeA,
yneM
|
| 12527203 |
Molecular phylogenetics of the RrmJ/fibrillarin superfamily of ribose 2'-O-methyltransferases. Gene Marcin Feder , Jakub Pas , Lucjan S Wyrwicz , Janusz M Bujnicki |
2003-01-02 |
cmoA,
rlmM,
rlmE
|
| 11917006 |
Comparative genomics and evolution of proteins involved in RNA metabolism. Nucleic Acids Res. Vivek Anantharaman , Eugene V Koonin , L Aravind |
2002-04-01 | - |
| 11574054 |
A functional update of the Escherichia coli K-12 genome. Genome Biol. M H Serres , S Gopal , L A Nahum , P Liang , T Gaasterland , M Riley |
2001-01-01 | - |
| 11293658 |
Acta Microbiol. Pol. J M Bujnicki , L Rychlewski |
2000-01-01 |
ECs3666,
rlmM,
rlmE
|
| 排名 | 科研单位 | 文献 |
|---|---|---|
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| 排名 | 研究人员 | 文献 |
|---|---|---|
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