| Type | Description |
|---|---|
| Definition | cell division coordinator CpoB |
| Date | Results | Publications |
|---|---|---|
| 2019-05-25 10:56:00 | We identified that molecular chaperone-encoding dnaK, cell division protein-encoding cpoB and repeat protein-encoding rhsC were associated with the cost reduction for pMCR1_1943, which may represent new mechanisms for host bacterial strains to compensate fitness costs imposed by large plasmids and warrant further studies. | 30586457 |
| 2010-10-23 11:04:00 | The authors show that the stable YbgF trimer undergoes a marked change in oligomeric state on binding TolA, forming a one-to-one complex with the Tol protein. | 20816983 |
| Type | IDs |
|---|---|
| Synonymous | ECK0731, ybgF |
| Gene |
UniProtKB-ID:
CPOB_ECOLI
UniprotKB:
P45955
UniParc:
UPI000013A332
EMBL:
AP009048,
U00096,
X65796
EnsemblGenome:
BAA35408,
b0742
KO:
ecj:JW0732,
eco:b0742
|
| Nucleutide sequences |
EMBL-CDS:
AAC73836.1,
BAA35408.1
EnsemblGenome_TRS:
BAA35408,
AAC73836
|
| Protein sequencees |
EnsemblGenome_PRO:
AAC73836,
BAA35408
RefSeq:
NP_415270.1
|
| Others |
UniRef100:
UniRef100_P45955
UniRef90:
UniRef90_P45955
UniRef50:
UniRef50_P45955
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
{{protein.nucleotideVersion}}
Ensembl: {{protein.nucleotideEnsembl}} |
{{protein.proteinVersion}}
Ensembl: {{protein.proteinEnsembl}} |
{{uniprot}} , |
Definition: {{{protein.definition}}}Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}} |
||||
| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
||||
暂无数据
| Pubmed编号 | 文献信息 | 发表日期 | 相关基因 |
|---|---|---|---|
| 30586457 |
Fitness cost of a mcr-1-carrying IncHI2 plasmid. PLoS ONE Ke Ma , Yu Feng , Zhiyong Zong |
2018-01-01 | - |
| 25951518 |
Elife Andrew N Gray , Alexander J F Egan , Inge L Van't Veer , Jolanda Verheul , Alexandre Colavin , Alexandra Koumoutsi , Jacob Biboy , A F Maarten Altelaar , Mirjam J Damen , Kerwyn Casey Huang , Jean-Pierre Simorre , Eefjan Breukink , Tanneke den Blaauwen , Athanasios Typas , Carol A Gross , Waldemar Vollmer |
2015-05-07 | - |
| 24561554 |
The binary protein-protein interaction landscape of Escherichia coli. Nat. Biotechnol. Seesandra V Rajagopala , Patricia Sikorski , Ashwani Kumar , Roberto Mosca , James Vlasblom , Roland Arnold , Jonathan Franca-Koh , Suman B Pakala , Sadhna Phanse , Arnaud Ceol , Roman Häuser , Gabriella Siszler , Stefan Wuchty , Andrew Emili , Mohan Babu , Patrick Aloy , Rembert Pieper , Peter Uetz |
2014-03-01 | - |
| 20816983 |
TolA modulates the oligomeric status of YbgF in the bacterial periplasm. J. Mol. Biol. Anne Marie Krachler , Amit Sharma , Anna Cauldwell , Grigorios Papadakos , Colin Kleanthous |
2010-10-22 | - |
| 20455268 |
Self-association of TPR domains: Lessons learned from a designed, consensus-based TPR oligomer. Proteins Anne Marie Krachler , Amit Sharma , Colin Kleanthous |
2010-07-01 | - |
| 17187058 |
Nat. Biotechnol. Peng Lu , Christine Vogel , Rong Wang , Xin Yao , Edward M Marcotte |
2007-01-01 |
sspA,
talB,
dnaK,
dnaJ,
rpsT,
ileS,
dapB,
carB,
ftsZ,
murE,
aceF,
acpP,
surA,
secA,
can,
aceE,
panB,
argF,
lpxA,
dksA,
lpd,
erpA,
skp,
dapD,
acnB,
tsf,
glnH,
fabZ,
metQ,
accA,
galM,
sodB,
panC,
pyrH,
codA,
opgG,
pepD,
tauB,
eno,
proC,
phoR,
thiI,
gpmA,
leuC,
tig,
clpP,
clpX,
lon,
adk,
htpG,
acrB,
trpD,
apt,
ydgH,
rplT,
purK,
ompT,
thrC,
ybeD,
ahpC,
purR,
glf,
serA,
miaB,
pgm,
seqA,
rfbB,
iscR,
asnB,
mprA,
fldA,
fur,
sucA,
sucB,
hisJ,
glnS,
sucC,
sucD,
gltA,
bioB,
pheT,
bioD,
metK,
sdhA,
ybiC,
tolB,
ybiT,
ldtB,
moeA,
gsiB,
yliE,
ihfA,
serS,
pflB,
serC,
aroA,
ihfB,
rpsA,
mukE
|
| 16352602 |
Defining the role of the Escherichia coli chaperone SecB using comparative proteomics. J Biol Chem Louise Baars , A Jimmy Ytterberg , David Drew , Samuel Wagner , Claudia Thilo , Klaas Jan van Wijk , Jan-Willem de Gier |
2006-04-14 | - |
| 16397293 |
Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner |
2006-01-01 |
pmrR,
yfaS,
torI,
yaeP,
ykfH,
ykgO,
ylcG,
rzoD,
ybdZ,
cydX,
gnsA,
insA,
ymgF,
ymiA,
yciX,
rzoR,
ynfO,
yniD,
yobH,
yoeF,
yoeB,
yohO,
arnE,
ypdJ,
ypeB,
ypfN,
ypjJ,
arfA,
yheV,
ysaB,
sgcB,
yjhX,
ytjA,
yibT,
yicS,
yidD,
yifL,
ghoT,
yjjZ,
mntS,
iroK,
yifN,
wecF,
yigE,
blr,
yggP,
cpxP,
ygaY,
hdfR,
thiS,
yedN,
greB,
rtcA,
smf,
ygcU,
ypjK,
hokE,
sslE,
glcF,
glcE,
glvC,
yhaM,
tdcG,
ytfR,
yehH,
hokB,
ldrD,
hokA,
ldrA,
ldrB,
ecnA,
ecnB,
gapC,
yfjD,
yhdP,
yjjV,
cysW,
hokC,
ghxQ,
tatD,
yjdP,
cutC,
nirC,
frlC,
aroK,
gntU,
yedS,
dgoD,
dgoA,
dgoR,
yigL,
ldrC,
ylbE,
ydbJ,
yeiW,
yehK,
yaiX,
yoeA,
yneM
|
| 16738553 |
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi |
2006-01-01 |
pmrR,
torI,
yaeP,
ykfH,
ykgO,
ylcG,
rzoD,
ybdZ,
cydX,
gnsA,
insA,
ymgF,
ymiA,
yciX,
rzoR,
ynfO,
yniD,
yobH,
yoeB,
yohO,
arnE,
ypeB,
ypfN,
ypjJ,
arfA,
yheV,
ysaB,
sgcB,
yjhX,
ytjA,
yibT,
yicS,
yidD,
yifL,
ghoT,
yjjZ,
mntS,
iroK,
wecF,
yigE,
blr,
yggP,
cpxP,
hdfR,
thiS,
greB,
rtcA,
smf,
ygcU,
ypjK,
hokE,
sslE,
glcF,
glcE,
yhaM,
tdcG,
ytfR,
hokB,
ldrD,
hokA,
ldrA,
ldrB,
ecnA,
ecnB,
yfjD,
yhdP,
yjjV,
cysW,
hokC,
ghxQ,
tatD,
yjdP,
cutC,
nirC,
frlC,
aroK,
gntU,
dgoD,
dgoA,
dgoR,
yigL,
ldrC,
ylbE,
ydbJ,
yeiW,
yehK,
yneM,
ykfM,
ylcI,
yciY,
yncL,
ylcH,
ynhF,
yciZ,
ydgU,
ypfM,
ymgI,
ymgJ,
dinQ
|
| 16294310 |
Proteomics Djamel Gully , Emmanuelle Bouveret |
2006-01-01 |
acpP,
secA,
pal,
tolR,
tolB,
mukB,
plsX,
tolA,
fabF,
fabB,
iscS,
pssA,
ybgF,
spoT,
plsB,
tolQ,
ybgC
|
| 排名 | 科研单位 | 文献 |
|---|---|---|
| {{affIndex+1}} |
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| 排名 | 研究人员 | 文献 |
|---|---|---|
| {{authorIndex+1}} |
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