casB - type I-E CRISPR system Cascade subunit CasB-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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947223 casB

基因描述

Type	Description
Definition	type I-E CRISPR system Cascade subunit CasB

研究结论

Date	Results	Publications
2013-02-09 11:38:00	Data indicate that all four CRISPR-associated CasB proteins TfuCasB1 (Tfu_1591), TfuCasB2 (Tfu_1599), TthCasB (TTHB189) and EcoCasB were able to bind ds-DNA and ss-RNA.	23079036

名称对应

Type	IDs
Synonymous	ECK2754, cse2, ygcK
Gene	UniProtKB-ID: CSE2_ECOLI UniprotKB: P76632 UniParc: UPI000013B040 EMBL: AP009048, U00096, U29579 EnsemblGenome: BAE76836, b2759 KO: ecj:JW2729, eco:b2759
Nucleutide sequences	EMBL-CDS: BAE76836.1, AAA69269.1, AAC75801.1 EnsemblGenome_TRS: BAE76836, AAC75801
Protein sequencees	EnsemblGenome_PRO: AAC75801, BAE76836 RefSeq: NP_417239.1
Others	UniRef100: UniRef100_P76632 UniRef90: UniRef90_P76632 UniRef50: UniRef50_P76632

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mRNA

Protein

UniprotKB

Description

Refseq

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Ensembl: {{protein.nucleotideEnsembl}}

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Location

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Pubmed编号	文献信息	发表日期	相关基因
25103409	Structural biology. Crystal structure of the CRISPR RNA-guided surveillance complex from Escherichia coli. Science Ryan N Jackson , Sarah M Golden , Paul B G van Erp , Joshua Carter , Edze R Westra , Stan J J Brouns , John van der Oost , Thomas C Terwilliger , Randy J Read , Blake Wiedenheft	2014-09-19	-
25123481	Structural biology. Crystal structure of a CRISPR RNA-guided surveillance complex bound to a ssDNA target. Science Sabin Mulepati , Annie HÃ©roux , Scott Bailey	2014-09-19	-
23079036	Nucleic acid binding surface and dimer interface revealed by CRISPR-associated CasB protein structures. FEBS Lett. Ki Hyun Nam , Qingqiu Huang , Ailong Ke	2012-11-16	-
18703739	Small CRISPR RNAs guide antiviral defense in prokaryotes. Science Stan J J Brouns , Matthijs M Jore , Magnus Lundgren , Edze R Westra , Rik J H Slijkhuis , Ambrosius P L Snijders , Mark J Dickman , Kira S Makarova , Eugene V Koonin , John van der Oost	2008-08-15	-
18703730	Molecular biology. Secret weapon. Science Ryland F Young	2008-08-15	-
16397293	Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner	2006-01-01	pmrR, yfaS, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeF, yoeB, yohO, arnE, ypdJ, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, yifN, wecF, yigE, blr, yggP, cpxP, ygaY, hdfR, thiS, yedN, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, glvC, yhaM, tdcG, ytfR, yehH, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, gapC, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, yedS, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yaiX, yoeA, yneM
16738553	Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi	2006-01-01	pmrR, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeB, yohO, arnE, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, wecF, yigE, blr, yggP, cpxP, hdfR, thiS, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, yhaM, tdcG, ytfR, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yneM, ykfM, ylcI, yciY, yncL, ylcH, ynhF, yciZ, ydgU, ypfM, ymgI, ymgJ, dinQ
16135227	Transposition is modulated by a diverse set of host factors in Escherichia coli and is stimulated by nutritional stress. Mol. Microbiol. Erin Twiss , Abbie M Coros , Norma P Tavakoli , Keith M Derbyshire	2005-09-01	sslE, yadC, yfgM, casB, ydfK, rsxE, rimP, yahD, yheS, yidA, yihT, hflX, ylaB, ykfA
9278503	The complete genome sequence of Escherichia coli K-12. Science F R Blattner , G Plunkett , C A Bloch , N T Perna , V Burland , M Riley , J Collado-Vides , J D Glasner , C K Rode , G F Mayhew , J Gregor , N W Davis , H A Kirkpatrick , M A Goeden , D J Rose , B Mau , Y Shao	1997-09-05	-

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