selU - tRNA 2-selenouridine synthase-BMKCloudï½ç¾è¿å®¢äº

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947063 selU

基因描述

Type	Description
Definition	tRNA 2-selenouridine synthase

研究结论

Date	Results	Publications
2019-06-29 10:50:00	The in vivo S2U-->Se2U and S2U-->geS2U transformations in tRNA, so far claimed to be the elementary reactions occurring independently in the same domain of the SelU enzyme, should be considered a combination of two consecutive events - geranylation (S2U-->geS2U) and selenation (geS2U-->Se2U).	29862510

名称对应

Type	IDs
Synonymous	ECK0496, mnmH, ybbB
Gene	UniProtKB-ID: SELU_ECOLI UniprotKB: P33667 UniParc: UPI000013A2CA EMBL: U82664, U00096, X60999, AP009048 EnsemblGenome: b0503, BAE76281 KO: eco:b0503, ecj:JW0491
Nucleutide sequences	EMBL-CDS: AAC73605.1, BAE76281.1, AAB40256.1, CAA43313.1 EnsemblGenome_TRS: AAC73605, BAE76281
Protein sequencees	EnsemblGenome_PRO: BAE76281, AAC73605 RefSeq: NP_415036.1
Others	UniRef100: UniRef100_C4ZUV3 UniRef90: UniRef90_Q8FK67 UniRef50: UniRef50_Q8ZR88

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mRNA

Protein

UniprotKB

Description

Refseq

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Pubmed编号	文献信息	发表日期	相关基因
29862510	Escherichia coli tRNA 2-selenouridine synthase (SelU) converts S2U-RNA to Se2U-RNA via S-geranylated-intermediate. FEBS Lett. Malgorzata Sierant , Grazyna Leszczynska , Klaudia Sadowska , Patrycja Komar , Ewa Radzikowska-Cieciura , Elzbieta Sochacka , Barbara Nawrot	2018-07-01	-
22983156	Discovery and biological characterization of geranylated RNA in bacteria. Nat. Chem. Biol. Christoph E Dumelin , Yiyun Chen , Aaron M Leconte , Y Grace Chen , David R Liu	2012-11-01	-
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
16738553	Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi	2006-01-01	pmrR, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeB, yohO, arnE, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, wecF, yigE, blr, yggP, cpxP, hdfR, thiS, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, yhaM, tdcG, ytfR, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yneM, ykfM, ylcI, yciY, yncL, ylcH, ynhF, yciZ, ydgU, ypfM, ymgI, ymgJ, dinQ
16397293	Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner	2006-01-01	pmrR, yfaS, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeF, yoeB, yohO, arnE, ypdJ, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, yifN, wecF, yigE, blr, yggP, cpxP, ygaY, hdfR, thiS, yedN, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, glvC, yhaM, tdcG, ytfR, yehH, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, gapC, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, yedS, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yaiX, yoeA, yneM
14594807	Functional diversity of the rhodanese homology domain: the Escherichia coli ybbB gene encodes a selenophosphate-dependent tRNA 2-selenouridine synthase. J Biol Chem Matt D Wolfe , Farzana Ahmed , Gerard M Lacourciere , Charles T Lauhon , Thressa C Stadtman , Timothy J Larson	2004-01-16	-
9278503	The complete genome sequence of Escherichia coli K-12. Science F R Blattner , G Plunkett , C A Bloch , N T Perna , V Burland , M Riley , J Collado-Vides , J D Glasner , C K Rode , G F Mayhew , J Gregor , N W Davis , H A Kirkpatrick , M A Goeden , D J Rose , B Mau , Y Shao	1997-09-05	-
7520175	A purified selenophosphate-dependent enzyme from Salmonella typhimurium catalyzes the replacement of sulfur in 2-thiouridine residues in tRNAs with selenium. Proc. Natl. Acad. Sci. U.S.A. Z Veres , T C Stadtman	1994-08-16	-
1766878	The RhsD-E subfamily of Escherichia coli K-12. Nucleic Acids Res. A B Sadosky , J A Gray , C W Hill	1991-12-01	-
6345544	Specific incorporation of selenium into lysine- and glutamate- accepting tRNAs from Escherichia coli. J Biol Chem A J Wittwer	1983-07-25	-

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