| Type | Description |
|---|---|
| Definition | porphyrinogen peroxidase |
| Date | Results | Publications |
|---|---|---|
| 2012-02-25 11:31:00 | These data clearly demonstrate that YfeX is not a dechelatase as reported but is a peroxidase that oxidizes endogenous porphyrinogens to porphyrins. | 22068980 |
| 2010-01-21 00:00:00 | YfeX and EfeB are widespread and highly conserved in bacteria. We propose that their physiological function is to retrieve iron from heme. | 19564607 |
| Type | IDs |
|---|---|
| Synonymous | ECK2426 |
| Gene |
UniProtKB-ID:
YFEX_ECOLI
UniprotKB:
P76536
UniParc:
UPI000013AE55
EMBL:
AP009048,
U00096
EnsemblGenome:
b2431,
BAE76711
KO:
eco:b2431,
ecj:JW2424
|
| Nucleutide sequences |
EMBL-CDS:
BAE76711.1,
AAC75484.2
EnsemblGenome_TRS:
AAC75484,
BAE76711
|
| Protein sequencees |
EnsemblGenome_PRO:
AAC75484,
BAE76711
RefSeq:
NP_416926.4
|
| Others |
UniRef100:
UniRef100_P76536
UniRef90:
UniRef90_P76536
UniRef50:
UniRef50_P76536
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
{{protein.nucleotideVersion}}
Ensembl: {{protein.nucleotideEnsembl}} |
{{protein.proteinVersion}}
Ensembl: {{protein.proteinEnsembl}} |
{{uniprot}} , |
Definition: {{{protein.definition}}}Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}} |
||||
| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
||||
暂无数据
| Pubmed编号 | 文献信息 | 发表日期 | 相关基因 |
|---|---|---|---|
| 21873635 |
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas |
2011-09-01 | - |
| 22068980 |
The Escherichia coli protein YfeX functions as a porphyrinogen oxidase, not a heme dechelatase. mBio Harry A Dailey , Alecia N Septer , Lauren Daugherty , Daniel Thames , Svetlana Gerdes , Eric V Stabb , Anne K Dunn , Tamara A Dailey , John D Phillips |
2011-01-01 | - |
| 19564607 |
Bacteria capture iron from heme by keeping tetrapyrrol skeleton intact. Proc. Natl. Acad. Sci. U.S.A. Sylvie Létoffé , Gesine Heuck , Philippe Delepelaire , Norbert Lange , Cécile Wandersman |
2009-07-14 |
efeB,
yfeX,
dppF
|
| 18304323 |
Protein abundance profiling of the Escherichia coli cytosol. BMC Genomics Yasushi Ishihama , Thorsten Schmidt , Juri Rappsilber , Matthias Mann , F Ulrich Hartl , Michael J Kerner , Dmitrij Frishman |
2008-01-01 | - |
| 16336047 |
Conserved and variable functions of the sigmaE stress response in related genomes. PLoS Biol. Virgil A Rhodius , Won Chul Suh , Gen Nonaka , Joyce West , Carol A Gross |
2006-01-01 |
lpxB,
lpxA,
rnhB,
skp,
bamA,
dnaE,
lpxD,
fabZ,
opgG,
yaiW,
rutR,
clpX,
lon,
ybfG,
ompA,
opgH,
narW,
rnt,
lpp,
ftnB,
wza,
wzb,
wzc,
hcp,
yfeK,
sbmA,
yfeS,
yfeX,
yfeY,
yfgD,
bamB,
der,
bepA,
rpoE,
rseC,
rseA,
rseB,
bamD,
rnlB,
dsbC,
recJ,
prfB,
ahpF,
bacA,
cca,
ygiM,
ydhI,
yraP,
hcr,
diaA,
greA,
rpoN,
hpf,
ptsN,
lptB,
yhbJ,
gspA,
fkpA,
malQ,
yhjJ,
yicJ,
yieE,
plsB
|
| 16397293 |
Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner |
2006-01-01 |
pmrR,
yfaS,
torI,
yaeP,
ykfH,
ykgO,
ylcG,
rzoD,
ybdZ,
cydX,
gnsA,
insA,
ymgF,
ymiA,
yciX,
rzoR,
ynfO,
yniD,
yobH,
yoeF,
yoeB,
yohO,
arnE,
ypdJ,
ypeB,
ypfN,
ypjJ,
arfA,
yheV,
ysaB,
sgcB,
yjhX,
ytjA,
yibT,
yicS,
yidD,
yifL,
ghoT,
yjjZ,
mntS,
iroK,
yifN,
wecF,
yigE,
blr,
yggP,
cpxP,
ygaY,
hdfR,
thiS,
yedN,
greB,
rtcA,
smf,
ygcU,
ypjK,
hokE,
sslE,
glcF,
glcE,
glvC,
yhaM,
tdcG,
ytfR,
yehH,
hokB,
ldrD,
hokA,
ldrA,
ldrB,
ecnA,
ecnB,
gapC,
yfjD,
yhdP,
yjjV,
cysW,
hokC,
ghxQ,
tatD,
yjdP,
cutC,
nirC,
frlC,
aroK,
gntU,
yedS,
dgoD,
dgoA,
dgoR,
yigL,
ldrC,
ylbE,
ydbJ,
yeiW,
yehK,
yaiX,
yoeA,
yneM
|
| 16738553 |
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi |
2006-01-01 |
pmrR,
torI,
yaeP,
ykfH,
ykgO,
ylcG,
rzoD,
ybdZ,
cydX,
gnsA,
insA,
ymgF,
ymiA,
yciX,
rzoR,
ynfO,
yniD,
yobH,
yoeB,
yohO,
arnE,
ypeB,
ypfN,
ypjJ,
arfA,
yheV,
ysaB,
sgcB,
yjhX,
ytjA,
yibT,
yicS,
yidD,
yifL,
ghoT,
yjjZ,
mntS,
iroK,
wecF,
yigE,
blr,
yggP,
cpxP,
hdfR,
thiS,
greB,
rtcA,
smf,
ygcU,
ypjK,
hokE,
sslE,
glcF,
glcE,
yhaM,
tdcG,
ytfR,
hokB,
ldrD,
hokA,
ldrA,
ldrB,
ecnA,
ecnB,
yfjD,
yhdP,
yjjV,
cysW,
hokC,
ghxQ,
tatD,
yjdP,
cutC,
nirC,
frlC,
aroK,
gntU,
dgoD,
dgoA,
dgoR,
yigL,
ldrC,
ylbE,
ydbJ,
yeiW,
yehK,
yneM,
ykfM,
ylcI,
yciY,
yncL,
ylcH,
ynhF,
yciZ,
ydgU,
ypfM,
ymgI,
ymgJ,
dinQ
|
| 16180237 |
Biotechnol. Bioeng. Babu Raman , M P Nandakumar , Vignesh Muthuvijayan , Mark R Marten |
2005-11-05 |
uspF,
yfeX,
ygiS,
yqeF,
yggX,
ytfQ
|
| 15911532 |
Mol Cell Proteomics Ana Lopez-Campistrous , Paul Semchuk , Lorne Burke , Taunja Palmer-Stone , Stephen J Brokx , Gordon Broderick , Drell Bottorff , Sandra Bolch , Joel H Weiner , Michael J Ellison |
2005-08-01 | - |
| 11574054 |
A functional update of the Escherichia coli K-12 genome. Genome Biol. M H Serres , S Gopal , L A Nahum , P Liang , T Gaasterland , M Riley |
2001-01-01 | - |
| 排名 | 科研单位 | 文献 |
|---|---|---|
| {{affIndex+1}} |
{{aff.value}} |
{{aff.size}} |
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| 排名 | 研究人员 | 文献 |
|---|---|---|
| {{authorIndex+1}} |
{{author.value}} |
{{author.size}} |
目前还没有研究热点人员