nfo - endonuclease IV-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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946669 nfo

基因描述

Type	Description
Definition	endonuclease IV

研究结论

Date	Results	Publications
2010-01-21 00:00:00	Biochemical, mutational & crystallographic characterization reveal a 3-metal ion mechanism for damage binding and incision; DNA-free and DNA-substrate complex structures capture substrate stabilization by Arg37 and show a distorted Zn3 ligand arrangement.	18408731
2010-01-21 00:00:00	Novel Nfo substrates alpha-2'-deoxyadenosine and alpha-thymidine play an important role in counteracting oxidative DNA base damage.	15568813
2010-01-21 00:00:00	analysis of the three-metal-ion catalytic mechanism of the DNA repair enzyme endonuclease IV	17242363
2010-01-21 00:00:00	Endonuclease IV and Exonuclease III have roles in counteracting DNA damage induced by the oxidative counterpart of UVB in E.coli	16524897

名称对应

Type	IDs
Synonymous	ECK2152
Gene	UniProtKB-ID: END4_ECOLI UniprotKB: P0A6C1 UniParc: UPI0000112BC1 EMBL: AP009048, U00096, M22591, U00007 EnsemblGenome: b2159, BAE76636 KO: eco:b2159, ecj:JW2146
Nucleutide sequences	EMBL-CDS: AAC75220.1, BAE76636.1, AAA24216.1, AAA60529.1 EnsemblGenome_TRS: BAE76636, AAC75220
Protein sequencees	EnsemblGenome_PRO: BAE76636, AAC75220 RefSeq: NP_416664.1
Others	UniRef100: UniRef100_P0A6C1 UniRef90: UniRef90_P0A6C1 UniRef50: UniRef50_P0A6C1

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mRNA

Protein

UniprotKB

Description

Refseq

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Ensembl: {{protein.nucleotideEnsembl}}

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Definition: {{{protein.definition}}}

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Location

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全选

Pubmed编号	文献信息	发表日期	相关基因
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
19892776	Lethal and mutagenic properties of MMS-generated DNA lesions in Escherichia coli cells deficient in BER and AlkB-directed DNA repair. Mutagenesis Anna Sikora , Damian Mielecki , Aleksandra Chojnacka , Jadwiga Nieminuszczy , Michal Wrzesinski , Elzbieta Grzesiuk	2010-03-01	xthA, nfo, alkB, nth
19751747	Coupling of the nucleotide incision and 3'-->5' exonuclease activities in Escherichia coli endonuclease IV: Structural and genetic evidences. Mutat. Res. Gali Golan , Alexander A Ishchenko , Bekbolat Khassenov , Gil Shoham , Murat K Saparbaev	2010-03-01	nfo
19617358	Genetic analysis of repair and damage tolerance mechanisms for DNA-protein cross-links in Escherichia coli. J Bacteriol Amir M H Salem , Toshiaki Nakano , Minako Takuwa , Nagisa Matoba , Tomohiro Tsuboi , Hiroaki Terato , Kazuo Yamamoto , Masami Yamada , Takehiko Nohmi , Hiroshi Ide	2009-09-01	-
18408731	DNA apurinic-apyrimidinic site binding and excision by endonuclease IV. Nat. Struct. Mol. Biol. Elsa D Garcin , David J Hosfield , Sunil A Desai , Brian J Haas , Magnar BjÃ¶ras , Richard P Cunningham , John A Tainer	2008-05-01	nfo
17242363	Unraveling the three-metal-ion catalytic mechanism of the DNA repair enzyme endonuclease IV. Proc. Natl. Acad. Sci. U.S.A. Ivaylo Ivanov , John A Tainer , J Andrew McCammon	2007-01-30	-
16524897	Endonuclease IV and exonuclease III are involved in the repair and mutagenesis of DNA lesions induced by UVB in Escherichia coli. Mutagenesis L L Souza , I R Eduardo , M PÃ¡dula , A C LeitÃ£o	2006-03-01	xthA, nfo
16473948	Uncoupling of the base excision and nucleotide incision repair pathways reveals their respective biological roles. Proc. Natl. Acad. Sci. U.S.A. Alexander A Ishchenko , Eric Deprez , Andrei Maksimenko , Jean-Claude Brochon , Patrick Tauc , Murat K Saparbaev	2006-02-21	nfo
16738553	Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi	2006-01-01	pmrR, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeB, yohO, arnE, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, wecF, yigE, blr, yggP, cpxP, hdfR, thiS, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, yhaM, tdcG, ytfR, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yneM, ykfM, ylcI, yciY, yncL, ylcH, ynhF, yciZ, ydgU, ypfM, ymgI, ymgJ, dinQ
16397293	Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner	2006-01-01	pmrR, yfaS, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeF, yoeB, yohO, arnE, ypdJ, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, yifN, wecF, yigE, blr, yggP, cpxP, ygaY, hdfR, thiS, yedN, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, glvC, yhaM, tdcG, ytfR, yehH, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, gapC, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, yedS, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yaiX, yoeA, yneM

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