dcd - dCTP deaminase-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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946593 dcd

基因描述

Type	Description
Definition	dCTP deaminase

研究结论

Date	Results	Publications
2010-01-21 00:00:00	The crystal structure of E138D in complex with dUTP showed a hydrogen bonding network in the active site similar to wild-type enzyme.	17996716
2010-01-21 00:00:00	The dCTP deaminase resembles a simple concerted system subjected to effector binding, but without the use of an allosteric site.	17651436
2010-01-21 00:00:00	Structures of dCTP deaminase from Escherichia coli with bound substrate and product	15539408
2007-11-05 21:38:00	N-terminus verified by Edman degradation on complete protein	1324907

名称对应

Type	IDs
Synonymous	ECK2059, dus, paxA
Gene	UniProtKB-ID: DCD_ECOLI UniprotKB: P28248 UniParc: UPI0000128F85 EMBL: M90069, U00096, AP009048 EnsemblGenome: b2065, BAA15918 KO: ecj:JW2050, eco:b2065
Nucleutide sequences	EMBL-CDS: BAA15918.1, AAA23669.1, AAC75126.1 EnsemblGenome_TRS: AAC75126, BAA15918
Protein sequencees	EnsemblGenome_PRO: BAA15918, AAC75126 RefSeq: NP_416569.1
Others	UniRef100: UniRef100_C4ZSF3 UniRef90: UniRef90_Q6D7B3 UniRef50: UniRef50_Q8EDX5

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mRNA

Protein

UniprotKB

Description

Refseq

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Pubmed编号	文献信息	发表日期	相关基因
27718375	Screen for genes involved in radiation survival of Escherichia coli and construction of a reference database. Mutat. Res. Neil J Sargentini , Nicholas P Gularte , Deborah A Hudman	2016-10-03	-
23218950	Mutational consequences of dNTP pool imbalances in E. coli. DNA Repair (Amst) Roel M Schaaper , Christopher K Mathews	2013-01-01	-
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
17996716	Mutational analysis of the nucleotide binding site of Escherichia coli dCTP deaminase. Arch. Biochem. Biophys. Majbritt Thymark , Eva Johansson , Sine Larsen , Martin WillemoÃ«s	2008-02-01	dcd
18304323	Protein abundance profiling of the Escherichia coli cytosol. BMC Genomics Yasushi Ishihama , Thorsten Schmidt , Juri Rappsilber , Matthias Mann , F Ulrich Hartl , Michael J Kerner , Dmitrij Frishman	2008-01-01	-
17651436	Regulation of dCTP deaminase from Escherichia coli by nonallosteric dTTP binding to an inactive form of the enzyme. FEBS J. Eva Johansson , Majbritt Thymark , Julie H Bynck , Mathias FanÃ¸ , Sine Larsen , Martin WillemoÃ«s	2007-08-01	dcd
16606699	Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res Mohammad Arifuzzaman , Maki Maeda , Aya Itoh , Kensaku Nishikata , Chiharu Takita , Rintaro Saito , Takeshi Ara , Kenji Nakahigashi , Hsuan-Cheng Huang , Aki Hirai , Kohei Tsuzuki , Seira Nakamura , Mohammad Altaf-Ul-Amin , Taku Oshima , Tomoya Baba , Natsuko Yamamoto , Tomoyo Kawamura , Tomoko Ioka-Nakamichi , Masanari Kitagawa , Masaru Tomita , Shigehiko Kanaya , Chieko Wada , Hirotada Mori	2006-05-01	-
16738553	Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi	2006-01-01	pmrR, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeB, yohO, arnE, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, wecF, yigE, blr, yggP, cpxP, hdfR, thiS, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, yhaM, tdcG, ytfR, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yneM, ykfM, ylcI, yciY, yncL, ylcH, ynhF, yciZ, ydgU, ypfM, ymgI, ymgJ, dinQ
16397293	Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner	2006-01-01	pmrR, yfaS, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeF, yoeB, yohO, arnE, ypdJ, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, yifN, wecF, yigE, blr, yggP, cpxP, ygaY, hdfR, thiS, yedN, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, glvC, yhaM, tdcG, ytfR, yehH, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, gapC, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, yedS, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yaiX, yoeA, yneM
15539408	Structures of dCTP deaminase from Escherichia coli with bound substrate and product: reaction mechanism and determinants of mono- and bifunctionality for a family of enzymes. J Biol Chem Eva Johansson , Mathias FanÃ¸ , Julie H Bynck , Jan Neuhard , Sine Larsen , Bent W Sigurskjold , Ulla Christensen , Martin WillemoÃ«s	2005-01-28	-

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