| Type | Description |
|---|---|
| Definition | putative c-di-GMP phosphodiesterase PdeD |
| Type | IDs |
|---|---|
| Synonymous | ECK1813, yoaD |
| Gene |
UniProtKB-ID:
PDED_ECOLI
UniprotKB:
P76261
UniParc:
UPI000013BC5A
EMBL:
U00096,
AP009048
EnsemblGenome:
BAA15622,
b1815
KO:
ecj:JW1804,
eco:b1815
|
| Nucleutide sequences |
EMBL-CDS:
AAC74885.2,
BAA15622.1
EnsemblGenome_TRS:
BAA15622,
AAC74885
|
| Protein sequencees |
EnsemblGenome_PRO:
AAC74885,
BAA15622
RefSeq:
NP_416329.4
|
| Others |
UniRef100:
UniRef100_P76261
UniRef90:
UniRef90_P76261
UniRef50:
UniRef50_P76261
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
{{protein.nucleotideVersion}}
Ensembl: {{protein.nucleotideEnsembl}} |
{{protein.proteinVersion}}
Ensembl: {{protein.proteinEnsembl}} |
{{uniprot}} , |
Definition: {{{protein.definition}}}Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}} |
||||
| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
||||
暂无数据
| Pubmed编号 | 文献信息 | 发表日期 | 相关基因 |
|---|---|---|---|
| 29514851 |
Transmembrane redox control and proteolysis of PdeC, a novel type of c-di-GMP phosphodiesterase. EMBO J. Susanne Herbst , Martin Lorkowski , Olga Sarenko , Thi Kim Loan Nguyen , Tina Jaenicke , Regine Hengge |
2018-04-13 | - |
| 19332833 |
Microbiology (Reading, Engl.) Nicole Sommerfeldt , Alexandra Possling , Gisela Becker , Christina Pesavento , Natalia Tschowri , Regine Hengge |
2009-04-01 |
yaiC,
yliE,
yliF,
ycdT,
ycgG,
dosP,
dosC,
gmr,
ydaM,
dgcZ,
ydiV,
yeaJ,
yoaD,
yeaI,
yedQ,
yegE,
rtn,
yfeA,
yfgF,
yfiR,
yfiN,
yneF,
yahA,
bluF,
csrD,
yhjH,
yhjK,
yjcC,
ylaB,
yeaP
|
| 16606699 |
Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res Mohammad Arifuzzaman , Maki Maeda , Aya Itoh , Kensaku Nishikata , Chiharu Takita , Rintaro Saito , Takeshi Ara , Kenji Nakahigashi , Hsuan-Cheng Huang , Aki Hirai , Kohei Tsuzuki , Seira Nakamura , Mohammad Altaf-Ul-Amin , Taku Oshima , Tomoya Baba , Natsuko Yamamoto , Tomoyo Kawamura , Tomoko Ioka-Nakamichi , Masanari Kitagawa , Masaru Tomita , Shigehiko Kanaya , Chieko Wada , Hirotada Mori |
2006-05-01 | - |
| 16513732 |
J. Bacteriol. Eva Brombacher , Andrea Baratto , Corinne Dorel , Paolo Landini |
2006-03-01 |
yaiC,
yoaD,
iraP,
cspA,
fecR,
csgD
|
| 16738553 |
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi |
2006-01-01 |
pmrR,
torI,
yaeP,
ykfH,
ykgO,
ylcG,
rzoD,
ybdZ,
cydX,
gnsA,
insA,
ymgF,
ymiA,
yciX,
rzoR,
ynfO,
yniD,
yobH,
yoeB,
yohO,
arnE,
ypeB,
ypfN,
ypjJ,
arfA,
yheV,
ysaB,
sgcB,
yjhX,
ytjA,
yibT,
yicS,
yidD,
yifL,
ghoT,
yjjZ,
mntS,
iroK,
wecF,
yigE,
blr,
yggP,
cpxP,
hdfR,
thiS,
greB,
rtcA,
smf,
ygcU,
ypjK,
hokE,
sslE,
glcF,
glcE,
yhaM,
tdcG,
ytfR,
hokB,
ldrD,
hokA,
ldrA,
ldrB,
ecnA,
ecnB,
yfjD,
yhdP,
yjjV,
cysW,
hokC,
ghxQ,
tatD,
yjdP,
cutC,
nirC,
frlC,
aroK,
gntU,
dgoD,
dgoA,
dgoR,
yigL,
ldrC,
ylbE,
ydbJ,
yeiW,
yehK,
yneM,
ykfM,
ylcI,
yciY,
yncL,
ylcH,
ynhF,
yciZ,
ydgU,
ypfM,
ymgI,
ymgJ,
dinQ
|
| 16397293 |
Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner |
2006-01-01 |
pmrR,
yfaS,
torI,
yaeP,
ykfH,
ykgO,
ylcG,
rzoD,
ybdZ,
cydX,
gnsA,
insA,
ymgF,
ymiA,
yciX,
rzoR,
ynfO,
yniD,
yobH,
yoeF,
yoeB,
yohO,
arnE,
ypdJ,
ypeB,
ypfN,
ypjJ,
arfA,
yheV,
ysaB,
sgcB,
yjhX,
ytjA,
yibT,
yicS,
yidD,
yifL,
ghoT,
yjjZ,
mntS,
iroK,
yifN,
wecF,
yigE,
blr,
yggP,
cpxP,
ygaY,
hdfR,
thiS,
yedN,
greB,
rtcA,
smf,
ygcU,
ypjK,
hokE,
sslE,
glcF,
glcE,
glvC,
yhaM,
tdcG,
ytfR,
yehH,
hokB,
ldrD,
hokA,
ldrA,
ldrB,
ecnA,
ecnB,
gapC,
yfjD,
yhdP,
yjjV,
cysW,
hokC,
ghxQ,
tatD,
yjdP,
cutC,
nirC,
frlC,
aroK,
gntU,
yedS,
dgoD,
dgoA,
dgoR,
yigL,
ldrC,
ylbE,
ydbJ,
yeiW,
yehK,
yaiX,
yoeA,
yneM
|
| 16045609 |
C-di-GMP: the dawning of a novel bacterial signalling system. Mol. Microbiol. Ute Römling , Mark Gomelsky , Michael Y Galperin |
2005-08-01 |
yaiC,
yliE,
yliF,
ycdT,
ycgG,
dosP,
dosC,
gmr,
ydaM,
dgcZ,
ydiV,
yeaJ,
yoaD,
yeaI,
yedQ,
yegE,
rtn,
yfeA,
yfgF,
yfiN,
yneF,
yahA,
bluF,
csrD,
yhjH,
yhjK,
yjcC,
ylaB,
yeaP
|
| 15818467 |
Characterization of the rdar morphotype, a multicellular behaviour in Enterobacteriaceae. Cell. Mol. Life Sci. U Römling |
2005-06-01 | - |
| 15306016 |
Mol. Microbiol. Roger Simm , Michael Morr , Abdul Kader , Manfred Nimtz , Ute Römling |
2004-08-01 |
yaiC,
dosC,
yoaD,
yhjH,
csgD
|
| 11967071 |
Over 1000 genes are involved in the DNA damage response of Escherichia coli. Mol. Microbiol. Pavel P Khil , R Daniel Camerini-Otero |
2002-04-01 | - |
| 排名 | 科研单位 | 文献 |
|---|---|---|
| {{affIndex+1}} |
{{aff.value}} |
{{aff.size}} |
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| 排名 | 研究人员 | 文献 |
|---|---|---|
| {{authorIndex+1}} |
{{author.value}} |
{{author.size}} |
目前还没有研究热点人员