Type | Description |
---|---|
Definition | DNA-binding transcriptional regulator RstA |
Date | Results | Publications |
---|---|---|
2019-01-12 11:56:00 | data suggest that deletion of RstA leads to delayed initiation of DNA replication, and RstA may affect initiation of replication by controlling expression of dnaA or hupA. Furthermore, the delayed initiation may by caused by the decreased activity of topoisomerase I in RstA mutant. | 30011323 |
Type | IDs |
---|---|
Synonymous | ECK1603, urpT |
Gene |
UniProtKB-ID:
RSTA_ECOLI
UniprotKB:
P52108
UniParc:
UPI00005F0BBC
EMBL:
U00096,
U41101,
AP009048
EnsemblGenome:
b1608,
BAA15346
KO:
eco:b1608,
ecj:JW1600
|
Nucleutide sequences |
EMBL-CDS:
AAA82081.1,
AAC74680.2,
BAA15346.1
EnsemblGenome_TRS:
BAA15346,
AAC74680
|
Protein sequencees |
EnsemblGenome_PRO:
BAA15346,
AAC74680
RefSeq:
NP_416125.2
|
Others |
UniRef100:
UniRef100_P52108
UniRef90:
UniRef90_P52108
UniRef50:
UniRef50_P52108
|
{{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
---|---|---|---|---|---|---|---|---|
Refseq |
{{protein.nucleotideVersion}}
Ensembl: {{protein.nucleotideEnsembl}} |
{{protein.proteinVersion}}
Ensembl: {{protein.proteinEnsembl}} |
{{uniprot}} , |
Definition: {{{protein.definition}}}Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}} |
||||
Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
暂无数据
Pubmed编号 | 文献信息 | 发表日期 | 相关基因 |
---|---|---|---|
30011323 |
Absence of RstA results in delayed initiation of DNA replication in Escherichia coli. PLoS ONE Yuan Yao , Yong Ma , Xiuli Chen , Rengui Bade , Cuilan Lv , Runxiu Zhu |
2018-01-01 | - |
21873635 |
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas |
2011-09-01 | - |
19376873 |
Conserved network of proteins essential for bacterial viability. J. Bacteriol. Jennifer I Handford , Bérengère Ize , Grant Buchanan , Gareth P Butland , Jack Greenblatt , Andrew Emili , Tracy Palmer |
2009-08-01 | - |
19465656 |
Grasping at shadows: revealing the elusive nature of essential genes. J Bacteriol Tarek Msadek |
2009-08-01 | - |
18631241 |
System-level mapping of Escherichia coli response regulator dimerization with FRET hybrids. Mol Microbiol Rong Gao , Yuan Tao , Ann M Stock |
2008-09-01 | - |
17468243 |
Genomic SELEX search for target promoters under the control of the PhoQP-RstBA signal relay cascade. J. Bacteriol. Hiroshi Ogasawara , Akiko Hasegawa , Emi Kanda , Takenori Miki , Kaneyoshi Yamamoto , Akira Ishihama |
2007-07-01 |
asr,
csgG,
csgF,
csgE,
rstA,
rcsA,
rcsB,
csgD
|
17293428 |
J. Bacteriol. Tracey L Campbell , Claudia S Ederer , Abdellah Allali-Hassani , Eric D Brown |
2007-04-01 |
rstA,
tsaE
|
16849790 |
Microbiology (Reading, Engl.) Lauren M Junker , Joseph E Peters , Anthony G Hay |
2006-08-01 |
ygaY,
glvC,
ytfR,
nirC,
aroK,
yjhR,
sspA,
folA,
setA,
secM,
lpxB,
glnD,
yafJ,
insH1,
ykfJ,
insH1,
panC,
yahJ,
renD,
yajQ,
priC,
leuC,
betT,
dps,
fsr,
ybbJ,
ydgI,
fau,
quuD,
fepG,
ybdH,
cmtA,
iscR,
ddlA,
ybgD,
chbB,
yagN,
ybhJ,
ybiH,
ybiT,
ybiY,
nanR,
ybjO,
ycaN,
ycaP,
ycbU,
hspQ,
pgaA,
cyoB,
ycdZ,
mdtG,
yceH,
ptsG,
ycjM,
holB,
lolE,
cspD,
pspF,
icd,
btuR,
yagL,
rnb,
insH1,
hybO,
recE,
feaB,
insH1,
ydcU,
ddpD,
ddpC,
narV,
narW,
ydfG,
ynfL,
mmuM,
insH1,
rstA,
ycgL,
ydjG,
cheW,
araF,
insH1,
yeeP,
insH1,
wcaJ,
yehE,
yehC,
yehA,
fruA,
osmF,
glpT,
menC,
cynX,
flk,
uxuB,
accD,
mnmC,
yfcR,
emrY
|
16738553 |
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi |
2006-01-01 |
pmrR,
torI,
yaeP,
ykfH,
ykgO,
ylcG,
rzoD,
ybdZ,
cydX,
gnsA,
insA,
ymgF,
ymiA,
yciX,
rzoR,
ynfO,
yniD,
yobH,
yoeB,
yohO,
arnE,
ypeB,
ypfN,
ypjJ,
arfA,
yheV,
ysaB,
sgcB,
yjhX,
ytjA,
yibT,
yicS,
yidD,
yifL,
ghoT,
yjjZ,
mntS,
iroK,
wecF,
yigE,
blr,
yggP,
cpxP,
hdfR,
thiS,
greB,
rtcA,
smf,
ygcU,
ypjK,
hokE,
sslE,
glcF,
glcE,
yhaM,
tdcG,
ytfR,
hokB,
ldrD,
hokA,
ldrA,
ldrB,
ecnA,
ecnB,
yfjD,
yhdP,
yjjV,
cysW,
hokC,
ghxQ,
tatD,
yjdP,
cutC,
nirC,
frlC,
aroK,
gntU,
dgoD,
dgoA,
dgoR,
yigL,
ldrC,
ylbE,
ydbJ,
yeiW,
yehK,
yneM,
ykfM,
ylcI,
yciY,
yncL,
ylcH,
ynhF,
yciZ,
ydgU,
ypfM,
ymgI,
ymgJ,
dinQ
|
16397293 |
Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner |
2006-01-01 |
pmrR,
yfaS,
torI,
yaeP,
ykfH,
ykgO,
ylcG,
rzoD,
ybdZ,
cydX,
gnsA,
insA,
ymgF,
ymiA,
yciX,
rzoR,
ynfO,
yniD,
yobH,
yoeF,
yoeB,
yohO,
arnE,
ypdJ,
ypeB,
ypfN,
ypjJ,
arfA,
yheV,
ysaB,
sgcB,
yjhX,
ytjA,
yibT,
yicS,
yidD,
yifL,
ghoT,
yjjZ,
mntS,
iroK,
yifN,
wecF,
yigE,
blr,
yggP,
cpxP,
ygaY,
hdfR,
thiS,
yedN,
greB,
rtcA,
smf,
ygcU,
ypjK,
hokE,
sslE,
glcF,
glcE,
glvC,
yhaM,
tdcG,
ytfR,
yehH,
hokB,
ldrD,
hokA,
ldrA,
ldrB,
ecnA,
ecnB,
gapC,
yfjD,
yhdP,
yjjV,
cysW,
hokC,
ghxQ,
tatD,
yjdP,
cutC,
nirC,
frlC,
aroK,
gntU,
yedS,
dgoD,
dgoA,
dgoR,
yigL,
ldrC,
ylbE,
ydbJ,
yeiW,
yehK,
yaiX,
yoeA,
yneM
|
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