rnt - RNase T-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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946159 rnt

基因描述

Type	Description
Definition	RNase T

研究结论

Date	Results	Publications
2019-10-12 10:11:00	e utilize Escherichia coli RNase T, a tRNA-processing enzyme responsible for the tRNA-CCA-end turnover, to generate an in vivo system for the evaluation of A-adding activity.	30828718
2016-10-22 10:48:00	Results provide evidence showing that the pi-pi stacking interactions between nucleobases and protein aromatic residues may guide the sequence-specific activity for RNase T.	26362012

名称对应

Type	IDs
Synonymous	ECK1648
Gene	UniProtKB-ID: RNT_ECOLI UniprotKB: P30014 UniParc: UPI00001344F7 EMBL: AP009048, L01622, U00096 EnsemblGenome: BAA15418, b1652 KO: eco:b1652, ecj:JW1644
Nucleutide sequences	EMBL-CDS: AAC74724.1, BAA15418.2, AAC37008.1 EnsemblGenome_TRS: BAA15418, AAC74724
Protein sequencees	EnsemblGenome_PRO: BAA15418, AAC74724 RefSeq: NP_416169.1
Others	UniRef100: UniRef100_P30014 UniRef90: UniRef90_P30014 UniRef50: UniRef50_P30014

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mRNA

Protein

UniprotKB

Description

Refseq

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Pubmed编号	文献信息	发表日期	相关基因
30828718	Dual expression of CCA-adding enzyme and RNase T in Escherichia coli generates a distinct cca growth phenotype with diverse applications. Nucleic Acids Res. Karolin Wellner , Marie-Theres PÃ¶hler , Heike Betat , Mario MÃ¶rl	2019-04-23	-
26362012	Aromatic residues in RNase T stack with nucleobases to guide the sequence-specific recognition and cleavage of nucleic acids. Protein Sci. Yulander Duh , Yu-Yuan Hsiao , Chia-Lung Li , Jason C Huang , Hanna S Yuan	2015-12-01	-
24594808	Structural insights into DNA repair by RNase T--an exonuclease processing 3' end of structured DNA in repair pathways. PLoS Biol. Yu-Yuan Hsiao , Woei-Horng Fang , Chia-Chia Lee , Yi-Ping Chen , Hanna S Yuan	2014-03-01	-
24561554	The binary protein-protein interaction landscape of Escherichia coli. Nat. Biotechnol. Seesandra V Rajagopala , Patricia Sikorski , Ashwani Kumar , Roberto Mosca , James Vlasblom , Roland Arnold , Jonathan Franca-Koh , Suman B Pakala , Sadhna Phanse , Arnaud Ceol , Roman HÃ¤user , Gabriella Siszler , Stefan Wuchty , Andrew Emili , Mohan Babu , Patrick Aloy , Rembert Pieper , Peter Uetz	2014-03-01	-
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
19906695	Processing of the Escherichia coli leuX tRNA transcript, encoding tRNA(Leu5), requires either the 3'-->5' exoribonuclease polynucleotide phosphorylase or RNase P to remove the Rho-independent transcription terminator. Nucleic Acids Res Bijoy K Mohanty , Sidney R Kushner	2010-01-01	-
19215777	Maturation and degradation of ribosomal RNA in bacteria. Prog Mol Biol Transl Sci Murray P Deutscher	2009-01-01	rne, rnb, rnt, pnp, rng, rnr
18824089	Systems based mapping demonstrates that recovery from alkylation damage requires DNA repair, RNA processing, and translation associated networks. Genomics John P Rooney , Ajish D George , Ashish Patil , Ulrike Begley , Erin Bessette , Maria R Zappala , Xin Huang , Douglas S Conklin , Richard P Cunningham , Thomas J Begley	2009-01-01	blr, aroK, yaiT, dnaK, rpsT, ais, dcuC, cynR, clpX, tfaD, stfR, ahpC, ubiF, ybgK, ybhH, ybhR, gsiD, potH, ybjO, rplY, hflD, minC, oppD, ybgI, ydaS, ydaT, rzpD, ydeM, ydcS, ddpF, bdm, ddpA, uidR, rnt, slyA, ruvA, ruvB, ruvC, yecN, fliO, hisB, alkB, ada, mnmC, pdxH, yfdQ, cysA, yaiS, recO, recN, yciF, recA, recB, recC, smpB, prfB, alkA, argO, ycjR, yggL, parC, dnaG, rpsU, marA, pnp, deaD, rbfA, rpsO, glmM, fis, arcB, dam, gph, mtlA, pstB, atpF, mnmG, xerC, yihX, cpxA, tpiA, yiiS, priA, oxyR, rplA, mtn, cadC, epmA, hfq, ytfA, holC, dnaT, arcA, yjjY, cydD, symE, gmhA
17543954	Genome-wide screening of genes affecting glycogen metabolism in Escherichia coli K-12. FEBS Lett. Gustavo Eydallin , Alejandro M Viale , MarÃa Teresa MorÃ¡n-Zorzano , Francisco JosÃ© MuÃ±oz , Manuel Montero , Edurne Baroja-FernÃ¡ndez , Javier Pozueta-Romero	2007-06-26	cysW, glnD, phoB, nusB, clpP, lon, serA, pgm, serC, phoP, galU, yciU, yciT, ydcS, ynfA, rnt, phoQ, cspC, dsbB, mgrB, nudB, pgl, ubiG, cysK, cysU, cysP, cysA, mdtH, purC, iscU, iscS, nlpD, proW, fdx, rpoS, cysD, cysN, cysI, cysJ, ygdD, yqgB, rbfA, greA, rpoN, lptB, rpmJ, cysG, glgP, glgA, glgB, glgX, glgC, cysE, pyrE, pstS, pstC, pstA, rfaH, dsbA, purH, hfq, miaA, rpsF, mgtA, serB
17437714	Crystal structure of RNase T, an exoribonuclease involved in tRNA maturation and end turnover. Structure Yuhong Zuo , Heping Zheng , Yong Wang , Maksymilian Chruszcz , Marcin Cymborowski , Tatiana Skarina , Alexei Savchenko , Arun Malhotra , Wladek Minor	2007-04-01	-

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