| Type | Description |
|---|---|
| Definition | Rac prophage; toxin YdaS |
| Type | IDs |
|---|---|
| Synonymous | ECK1355 |
| Gene |
UniProtKB-ID:
YDAS_ECOLI
UniprotKB:
P76063
UniParc:
UPI000013A8F7
EMBL:
AP009048,
U00096
EnsemblGenome:
b1357,
BAE76412
KO:
eco:b1357,
ecj:JW1352
|
| Nucleutide sequences |
EMBL-CDS:
AAC74439.1,
BAE76412.1
EnsemblGenome_TRS:
AAC74439,
BAE76412
|
| Protein sequencees |
EnsemblGenome_PRO:
AAC74439,
BAE76412
RefSeq:
NP_415875.1
|
| Others |
UniRef100:
UniRef100_P76063
UniRef90:
UniRef90_P76063
UniRef50:
UniRef50_P76063
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
{{protein.nucleotideVersion}}
Ensembl: {{protein.nucleotideEnsembl}} |
{{protein.proteinVersion}}
Ensembl: {{protein.proteinEnsembl}} |
{{uniprot}} , |
Definition: {{{protein.definition}}}Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}} |
||||
| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
||||
暂无数据
| Pubmed编号 | 文献信息 | 发表日期 | 相关基因 |
|---|---|---|---|
| 29205228 |
mSphere Revathy Krishnamurthi , Swagatha Ghosh , Supriya Khedkar , Aswin Sai Narain Seshasayee |
2017-11-22 | - |
| 19943910 |
Mol. Microbiol. Mikkel Christensen-Dalsgaard , Mikkel Girke Jørgensen , Kenn Gerdes |
2010-01-01 |
yafO,
yafN,
mqsA,
ydaS,
ydaT,
yfeC,
yfeD,
mqsR,
higB,
higA
|
| 18824089 |
Genomics John P Rooney , Ajish D George , Ashish Patil , Ulrike Begley , Erin Bessette , Maria R Zappala , Xin Huang , Douglas S Conklin , Richard P Cunningham , Thomas J Begley |
2009-01-01 |
blr,
aroK,
yaiT,
dnaK,
rpsT,
ais,
dcuC,
cynR,
clpX,
tfaD,
stfR,
ahpC,
ubiF,
ybgK,
ybhH,
ybhR,
gsiD,
potH,
ybjO,
rplY,
hflD,
minC,
oppD,
ybgI,
ydaS,
ydaT,
rzpD,
ydeM,
ydcS,
ddpF,
bdm,
ddpA,
uidR,
rnt,
slyA,
ruvA,
ruvB,
ruvC,
yecN,
fliO,
hisB,
alkB,
ada,
mnmC,
pdxH,
yfdQ,
cysA,
yaiS,
recO,
recN,
yciF,
recA,
recB,
recC,
smpB,
prfB,
alkA,
argO,
ycjR,
yggL,
parC,
dnaG,
rpsU,
marA,
pnp,
deaD,
rbfA,
rpsO,
glmM,
fis,
arcB,
dam,
gph,
mtlA,
pstB,
atpF,
mnmG,
xerC,
yihX,
cpxA,
tpiA,
yiiS,
priA,
oxyR,
rplA,
mtn,
cadC,
epmA,
hfq,
ytfA,
holC,
dnaT,
arcA,
yjjY,
cydD,
symE,
gmhA
|
| 17678530 |
RASTA-Bacteria: a web-based tool for identifying toxin-antitoxin loci in prokaryotes. Genome Biol. Emeric W Sevin , Frédérique Barloy-Hubler |
2007-01-01 |
ydaS,
ydaT,
yfeC,
yfeD
|
| 16738553 |
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi |
2006-01-01 |
pmrR,
torI,
yaeP,
ykfH,
ykgO,
ylcG,
rzoD,
ybdZ,
cydX,
gnsA,
insA,
ymgF,
ymiA,
yciX,
rzoR,
ynfO,
yniD,
yobH,
yoeB,
yohO,
arnE,
ypeB,
ypfN,
ypjJ,
arfA,
yheV,
ysaB,
sgcB,
yjhX,
ytjA,
yibT,
yicS,
yidD,
yifL,
ghoT,
yjjZ,
mntS,
iroK,
wecF,
yigE,
blr,
yggP,
cpxP,
hdfR,
thiS,
greB,
rtcA,
smf,
ygcU,
ypjK,
hokE,
sslE,
glcF,
glcE,
yhaM,
tdcG,
ytfR,
hokB,
ldrD,
hokA,
ldrA,
ldrB,
ecnA,
ecnB,
yfjD,
yhdP,
yjjV,
cysW,
hokC,
ghxQ,
tatD,
yjdP,
cutC,
nirC,
frlC,
aroK,
gntU,
dgoD,
dgoA,
dgoR,
yigL,
ldrC,
ylbE,
ydbJ,
yeiW,
yehK,
yneM,
ykfM,
ylcI,
yciY,
yncL,
ylcH,
ynhF,
yciZ,
ydgU,
ypfM,
ymgI,
ymgJ,
dinQ
|
| 16397293 |
Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner |
2006-01-01 |
pmrR,
yfaS,
torI,
yaeP,
ykfH,
ykgO,
ylcG,
rzoD,
ybdZ,
cydX,
gnsA,
insA,
ymgF,
ymiA,
yciX,
rzoR,
ynfO,
yniD,
yobH,
yoeF,
yoeB,
yohO,
arnE,
ypdJ,
ypeB,
ypfN,
ypjJ,
arfA,
yheV,
ysaB,
sgcB,
yjhX,
ytjA,
yibT,
yicS,
yidD,
yifL,
ghoT,
yjjZ,
mntS,
iroK,
yifN,
wecF,
yigE,
blr,
yggP,
cpxP,
ygaY,
hdfR,
thiS,
yedN,
greB,
rtcA,
smf,
ygcU,
ypjK,
hokE,
sslE,
glcF,
glcE,
glvC,
yhaM,
tdcG,
ytfR,
yehH,
hokB,
ldrD,
hokA,
ldrA,
ldrB,
ecnA,
ecnB,
gapC,
yfjD,
yhdP,
yjjV,
cysW,
hokC,
ghxQ,
tatD,
yjdP,
cutC,
nirC,
frlC,
aroK,
gntU,
yedS,
dgoD,
dgoA,
dgoR,
yigL,
ldrC,
ylbE,
ydbJ,
yeiW,
yehK,
yaiX,
yoeA,
yneM
|
| 12886937 |
Prophages and bacterial genomics: what have we learned so far? Mol. Microbiol. Sherwood Casjens |
2003-07-01 | - |
| 9278503 |
The complete genome sequence of Escherichia coli K-12. Science F R Blattner , G Plunkett , C A Bloch , N T Perna , V Burland , M Riley , J Collado-Vides , J D Glasner , C K Rode , G F Mayhew , J Gregor , N W Davis , H A Kirkpatrick , M A Goeden , D J Rose , B Mau , Y Shao |
1997-09-05 | - |
| 排名 | 科研单位 | 文献 |
|---|---|---|
| {{affIndex+1}} |
{{aff.value}} |
{{aff.size}} |
目前还没有研究热点单位
| 排名 | 研究人员 | 文献 |
|---|---|---|
| {{authorIndex+1}} |
{{author.value}} |
{{author.size}} |
目前还没有研究热点人员