ralR - Rac prophage; endodeoxyribonuclease toxin RalR-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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945914 ralR

基因描述

Type	Description
Definition	Rac prophage; endodeoxyribonuclease toxin RalR

研究结论

Date	Results	Publications
2014-08-09 11:01:00	RalR does not inhibit restriction modification but instead is part of a toxin/antitoxin system and functions as a non-specific DNase.	24748661

名称对应

Type	IDs
Synonymous	ECK1345, lar, ydaB
Gene	UniProtKB-ID: RALR_ECOLI UniprotKB: P33229 UniParc: UPI000012E22C EMBL: U00096, L23927, AP009048 EnsemblGenome: BAA14948, b1348 KO: ecj:JW5208, eco:b1348
Nucleutide sequences	EMBL-CDS: AAA16180.1, BAA14948.1, AAC74430.1 EnsemblGenome_TRS: AAC74430, BAA14948
Protein sequencees	EnsemblGenome_PRO: BAA14948, AAC74430 RefSeq: NP_415864.1
Others	UniRef100: UniRef100_P33229 UniRef90: UniRef90_P33229 UniRef50: UniRef50_P33229

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mRNA

Protein

UniprotKB

Description

Refseq

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Pubmed编号	文献信息	发表日期	相关基因
24748661	RalR (a DNase) and RalA (a small RNA) form a type I toxin-antitoxin system in Escherichia coli. Nucleic Acids Res. Yunxue Guo , Cecilia Quiroga , Qin Chen , Michael J McAnulty , Michael J Benedik , Thomas K Wood , Xiaoxue Wang	2014-06-01	ralR
16677300	Control of the endonuclease activity of type I restriction-modification systems is required to maintain chromosome integrity following homologous recombination. Mol. Microbiol. Garry W Blakely , Noreen E Murray	2006-05-01	clpP, clpX, ralR, rnhA, recG
16738553	Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi	2006-01-01	pmrR, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeB, yohO, arnE, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, wecF, yigE, blr, yggP, cpxP, hdfR, thiS, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, yhaM, tdcG, ytfR, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yneM, ykfM, ylcI, yciY, yncL, ylcH, ynhF, yciZ, ydgU, ypfM, ymgI, ymgJ, dinQ
16397293	Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner	2006-01-01	pmrR, yfaS, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeF, yoeB, yohO, arnE, ypdJ, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, yifN, wecF, yigE, blr, yggP, cpxP, ygaY, hdfR, thiS, yedN, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, glvC, yhaM, tdcG, ytfR, yehH, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, gapC, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, yedS, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yaiX, yoeA, yneM
16237019	Type III restriction is alleviated by bacteriophage (RecE) homologous recombination function but enhanced by bacterial (RecBCD) function. J. Bacteriol. Naofumi Handa , Ichizo Kobayashi	2005-11-01	ralR, recT, recE
15883881	Comparison of the PhoPQ regulon in Escherichia coli and Salmonella typhimurium. J. Mol. Evol. Pieter Monsieurs , Sigrid De Keersmaecker , William W Navarre , Martin W Bader , Frank De Smet , Michael McClelland , Ferric C Fang , Bart De Moor , Jos Vanderleyden , Kathleen Marchal	2005-04-01	-
12886937	Prophages and bacterial genomics: what have we learned so far? Mol. Microbiol. Sherwood Casjens	2003-07-01	-
9278503	The complete genome sequence of Escherichia coli K-12. Science F R Blattner , G Plunkett , C A Bloch , N T Perna , V Burland , M Riley , J Collado-Vides , J D Glasner , C K Rode , G F Mayhew , J Gregor , N W Davis , H A Kirkpatrick , M A Goeden , D J Rose , B Mau , Y Shao	1997-09-05	-
9097039	A 570-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 28.0-40.1 min region on the linkage map. DNA Res. H Aiba , T Baba , K Hayashi , T Inada , K Isono , T Itoh , H Kasai , K Kashimoto , S Kimura , M Kitakawa , M Kitagawa , K Makino , T Miki , K Mizobuchi , H Mori , T Mori , K Motomura , S Nakade , Y Nakamura , H Nashimoto , Y Nishio , T Oshima , N Saito , G Sampei , T Horiuchi	1997-12-31	-
7476171	Restriction alleviation and modification enhancement by the Rac prophage of Escherichia coli K-12. Mol. Microbiol. G King , N E Murray	1995-05-01	-

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