| Type | Description |
|---|---|
| Definition | cyclic di-GMP phosphodiesterase PdeR |
| Date | Results | Publications |
|---|---|---|
| 2013-10-19 11:02:00 | The enzymatic activity of YciR, that is, the binding and degradation of c-di-GMP, interferes with its second activity, that is, an inhibition of YdaM by direct interaction. | 23708798 |
| Type | IDs |
|---|---|
| Synonymous | ECK1280, gmr, yciR |
| Gene |
UniProtKB-ID:
PDER_ECOLI
UniprotKB:
P77334
UniParc:
UPI000013A6CA
EMBL:
AP009048,
U00096,
L40788
EnsemblGenome:
BAA14839,
b1285
KO:
ecj:JW1278,
eco:b1285
|
| Nucleutide sequences |
EMBL-CDS:
AAC74367.1,
BAA14839.1
EnsemblGenome_TRS:
BAA14839,
AAC74367
|
| Protein sequencees |
EnsemblGenome_PRO:
AAC74367,
BAA14839
RefSeq:
NP_415801.1
|
| Others |
UniRef100:
UniRef100_P77334
UniRef90:
UniRef90_P77334
UniRef50:
UniRef50_P77334
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
{{protein.nucleotideVersion}}
Ensembl: {{protein.nucleotideEnsembl}} |
{{protein.proteinVersion}}
Ensembl: {{protein.proteinEnsembl}} |
{{uniprot}} , |
Definition: {{{protein.definition}}}Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}} |
||||
| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
||||
暂无数据
| Pubmed编号 | 文献信息 | 发表日期 | 相关基因 |
|---|---|---|---|
| 23708798 |
EMBO J. Sandra Lindenberg , Gisela Klauck , Christina Pesavento , Eberhard Klauck , Regine Hengge |
2013-07-17 |
gmr
|
| 19332833 |
Microbiology (Reading, Engl.) Nicole Sommerfeldt , Alexandra Possling , Gisela Becker , Christina Pesavento , Natalia Tschowri , Regine Hengge |
2009-04-01 |
yaiC,
yliE,
yliF,
ycdT,
ycgG,
dosP,
dosC,
gmr,
ydaM,
dgcZ,
ydiV,
yeaJ,
yoaD,
yeaI,
yedQ,
yegE,
rtn,
yfeA,
yfgF,
yfiR,
yfiN,
yneF,
yahA,
bluF,
csrD,
yhjH,
yhjK,
yjcC,
ylaB,
yeaP
|
| 18765794 |
Inverse regulatory coordination of motility and curli-mediated adhesion in Escherichia coli. Genes Dev Christina Pesavento , Gisela Becker , Nicole Sommerfeldt , Alexandra Possling , Natalia Tschowri , Anika Mehlis , Regine Hengge |
2008-09-01 | - |
| 17122336 |
Genome-wide screening of genes required for swarming motility in Escherichia coli K-12. J. Bacteriol. Tetsuyoshi Inoue , Ryuji Shingaki , Shotaro Hirose , Kaori Waki , Hirotada Mori , Kazuhiro Fukui |
2007-02-01 |
wecF,
gapC,
ydbA,
ygaQ,
dnaK,
wecB,
mrcB,
lpd,
skp,
argP,
gmhB,
hscA,
rof,
galM,
cusR,
pal,
tusE,
yaiW,
cvpA,
cyoA,
htpG,
dps,
ninE,
purK,
fes,
entF,
fepA,
fepG,
ybdH,
fepD,
ybdO,
ybeD,
lipA,
ubiF,
pgm,
asnB,
nagC,
sdhB,
sucA,
sucB,
sucD,
sdhC,
tolR,
sapF,
arnF,
galE,
sdhA,
yqaA,
ybiA,
tolB,
cmk,
ompA,
mgsA,
hspQ,
hyaA,
hyaB,
ycdY,
ndk,
flgN,
flgE,
ynfG,
flgF,
flgL,
flgG,
flgK,
aldA,
flgB,
ymfA,
hflD,
galU,
cvrA,
treA,
cysB,
narH,
chaC,
ppdC,
oppC,
flgD,
fucU,
ogt,
rssB,
trpL,
osmB,
gmr,
ycjW,
tpx,
ydaT,
pgrR,
prpD,
ydcX,
mpaA,
hicA,
fabH,
ydcZ,
yncH,
osmC,
ppiD,
hipB,
htpX
|
| 17010156 |
Cyclic-di-GMP-mediated signalling within the sigma network of Escherichia coli. Mol. Microbiol. Harald Weber , Christina Pesavento , Alexandra Possling , Gilbert Tischendorf , Regine Hengge |
2006-11-01 |
yaiC,
hns,
dosC,
gmr,
ydaM,
ydiV,
yeaI,
yedQ,
stpA,
rpoS,
csgD
|
| 16397293 |
Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner |
2006-01-01 |
pmrR,
yfaS,
torI,
yaeP,
ykfH,
ykgO,
ylcG,
rzoD,
ybdZ,
cydX,
gnsA,
insA,
ymgF,
ymiA,
yciX,
rzoR,
ynfO,
yniD,
yobH,
yoeF,
yoeB,
yohO,
arnE,
ypdJ,
ypeB,
ypfN,
ypjJ,
arfA,
yheV,
ysaB,
sgcB,
yjhX,
ytjA,
yibT,
yicS,
yidD,
yifL,
ghoT,
yjjZ,
mntS,
iroK,
yifN,
wecF,
yigE,
blr,
yggP,
cpxP,
ygaY,
hdfR,
thiS,
yedN,
greB,
rtcA,
smf,
ygcU,
ypjK,
hokE,
sslE,
glcF,
glcE,
glvC,
yhaM,
tdcG,
ytfR,
yehH,
hokB,
ldrD,
hokA,
ldrA,
ldrB,
ecnA,
ecnB,
gapC,
yfjD,
yhdP,
yjjV,
cysW,
hokC,
ghxQ,
tatD,
yjdP,
cutC,
nirC,
frlC,
aroK,
gntU,
yedS,
dgoD,
dgoA,
dgoR,
yigL,
ldrC,
ylbE,
ydbJ,
yeiW,
yehK,
yaiX,
yoeA,
yneM
|
| 16738553 |
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi |
2006-01-01 |
pmrR,
torI,
yaeP,
ykfH,
ykgO,
ylcG,
rzoD,
ybdZ,
cydX,
gnsA,
insA,
ymgF,
ymiA,
yciX,
rzoR,
ynfO,
yniD,
yobH,
yoeB,
yohO,
arnE,
ypeB,
ypfN,
ypjJ,
arfA,
yheV,
ysaB,
sgcB,
yjhX,
ytjA,
yibT,
yicS,
yidD,
yifL,
ghoT,
yjjZ,
mntS,
iroK,
wecF,
yigE,
blr,
yggP,
cpxP,
hdfR,
thiS,
greB,
rtcA,
smf,
ygcU,
ypjK,
hokE,
sslE,
glcF,
glcE,
yhaM,
tdcG,
ytfR,
hokB,
ldrD,
hokA,
ldrA,
ldrB,
ecnA,
ecnB,
yfjD,
yhdP,
yjjV,
cysW,
hokC,
ghxQ,
tatD,
yjdP,
cutC,
nirC,
frlC,
aroK,
gntU,
dgoD,
dgoA,
dgoR,
yigL,
ldrC,
ylbE,
ydbJ,
yeiW,
yehK,
yneM,
ykfM,
ylcI,
yciY,
yncL,
ylcH,
ynhF,
yciZ,
ydgU,
ypfM,
ymgI,
ymgJ,
dinQ
|
| 16045609 |
C-di-GMP: the dawning of a novel bacterial signalling system. Mol. Microbiol. Ute Römling , Mark Gomelsky , Michael Y Galperin |
2005-08-01 |
yaiC,
yliE,
yliF,
ycdT,
ycgG,
dosP,
dosC,
gmr,
ydaM,
dgcZ,
ydiV,
yeaJ,
yoaD,
yeaI,
yedQ,
yegE,
rtn,
yfeA,
yfgF,
yfiN,
yneF,
yahA,
bluF,
csrD,
yhjH,
yhjK,
yjcC,
ylaB,
yeaP
|
| 15818467 |
Characterization of the rdar morphotype, a multicellular behaviour in Enterobacteriaceae. Cell. Mol. Life Sci. U Römling |
2005-06-01 | - |
| 12665241 |
Degradation of mRNA in Escherichia coli. IUBMB Life Chaitanya Jain |
2002-12-01 |
rne,
rnb,
gmr,
rnd,
rnc,
srmB,
rnlA,
rng,
rraA,
rraB
|
| 排名 | 科研单位 | 文献 |
|---|---|---|
| {{affIndex+1}} |
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| 排名 | 研究人员 | 文献 |
|---|---|---|
| {{authorIndex+1}} |
{{author.value}} |
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目前还没有研究热点人员