ppdD - prepilin peptidase-dependent protein-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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945817 ppdD

基因描述

Type	Description
Definition	prepilin peptidase-dependent protein

研究结论

Date	Results	Publications
2020-05-02 11:52:00	The molecular structure of the periplasmic domain of PpdD has been defined.	31056419

名称对应

Type	IDs
Synonymous	ECK0107
Gene	UniProtKB-ID: PPDD_ECOLI UniprotKB: P36647 UniParc: UPI000013204F EMBL: U00096, L28105, AP009048, L20834 EnsemblGenome: b0108, BAB96678 KO: ecj:JW0104, eco:b0108
Nucleutide sequences	EMBL-CDS: BAB96678.2, AAC73219.1, AAC36923.1 EnsemblGenome_TRS: BAB96678, AAC73219
Protein sequencees	EnsemblGenome_PRO: BAB96678, AAC73219 RefSeq: NP_414650.1
Others	UniRef100: UniRef100_P36647 UniRef90: UniRef90_P36647 UniRef50: UniRef50_P36647

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mRNA

Protein

UniprotKB

Description

Refseq

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Ensembl: {{protein.nucleotideEnsembl}}

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Ensembl: {{protein.proteinEnsembl}}

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Location

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Pubmed编号	文献信息	发表日期	相关基因
31056419	Structure and Assembly of the Enterohemorrhagic Escherichia coli Type 4 Pilus. Structure Benjamin Bardiaux , Gisele Cardoso de Amorim , Areli Luna Rico , Weili Zheng , Ingrid Guilvout , Camille Jollivet , Michael Nilges , Edward H Egelman , Nadia Izadi-Pruneyre , Olivera Francetic	2019-07-02	-
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
19011021	Transforming DNA uptake gene orthologs do not mediate spontaneous plasmid transformation in Escherichia coli. J. Bacteriol. Dongchang Sun , Xuewu Zhang , Lingyu Wang , Marc Prudhomme , Zhixiong Xie , Bernard Martin , Jean-Pierre Claverys	2009-02-01	smf, ycaI, ppdD, gspD, hofQ, rlmJ
17068078	Non-canonical CRP sites control competence regulons in Escherichia coli and many other gamma-proteobacteria. Nucleic Acids Res. Andrew D S Cameron , Rosemary J Redfield	2006-01-01	smf, ppdA, ycaI, ppdD, ybaV, sxy, sbmC, crp, hofM, gntX, yifB, yicR
16397293	Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner	2006-01-01	pmrR, yfaS, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeF, yoeB, yohO, arnE, ypdJ, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, yifN, wecF, yigE, blr, yggP, cpxP, ygaY, hdfR, thiS, yedN, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, glvC, yhaM, tdcG, ytfR, yehH, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, gapC, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, yedS, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yaiX, yoeA, yneM
16738553	Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi	2006-01-01	pmrR, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeB, yohO, arnE, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, wecF, yigE, blr, yggP, cpxP, hdfR, thiS, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, yhaM, tdcG, ytfR, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yneM, ykfM, ylcI, yciY, yncL, ylcH, ynhF, yciZ, ydgU, ypfM, ymgI, ymgJ, dinQ
10811613	Pilus formation and protein secretion by the same machinery in Escherichia coli. EMBO J. N Sauvonnet , G Vignon , A P Pugsley , P Gounon	2000-05-15	ppdD
10633126	PpdD type IV pilin of Escherichia coli K-12 can Be assembled into pili in Pseudomonas aeruginosa. J Bacteriol N Sauvonnet , P Gounon , A P Pugsley	2000-02-01	-
9278503	The complete genome sequence of Escherichia coli K-12. Science F R Blattner , G Plunkett , C A Bloch , N T Perna , V Burland , M Riley , J Collado-Vides , J D Glasner , C K Rode , G F Mayhew , J Gregor , N W Davis , H A Kirkpatrick , M A Goeden , D J Rose , B Mau , Y Shao	1997-09-05	-
7959070	Escherichia coli contains a set of genes homologous to those involved in protein secretion, DNA uptake and the assembly of type-4 fimbriae in other bacteria. Gene C B Whitchurch , J S Mattick	1994-12-02	-

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