| Type | Description |
|---|---|
| Definition | L,D-transpeptidase YcfS |
| Date | Results | Publications |
|---|---|---|
| 2010-01-21 00:00:00 | Escherichia coli Ldt(fm) homologues are responsible for the attachment of the Braun lipoprotein to murein | 17369299 |
| Type | IDs |
|---|---|
| Synonymous | ECK1099, ycfS |
| Gene |
UniProtKB-ID:
YCFS_ECOLI
UniprotKB:
P75954
UniParc:
UPI000003EB73
EMBL:
U00096,
AP009048
EnsemblGenome:
b1113,
BAA35928
KO:
eco:b1113,
ecj:JW5820
|
| Nucleutide sequences |
EMBL-CDS:
AAC74197.1,
BAA35928.1
EnsemblGenome_TRS:
AAC74197,
BAA35928
|
| Protein sequencees |
EnsemblGenome_PRO:
AAC74197,
BAA35928
RefSeq:
NP_415631.1
|
| Others |
UniRef100:
UniRef100_P75954
UniRef90:
UniRef90_P75954
UniRef50:
UniRef50_P75954
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
{{protein.nucleotideVersion}}
Ensembl: {{protein.nucleotideEnsembl}} |
{{protein.proteinVersion}}
Ensembl: {{protein.proteinEnsembl}} |
{{uniprot}} , |
Definition: {{{protein.definition}}}Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}} |
||||
| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
||||
暂无数据
| Pubmed编号 | 文献信息 | 发表日期 | 相关基因 |
|---|---|---|---|
| 21873635 |
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas |
2011-09-01 | - |
| 18456808 |
Identification of the L,D-transpeptidases for peptidoglycan cross-linking in Escherichia coli. J Bacteriol Sophie Magnet , Lionel Dubost , Arul Marie , Michel Arthur , Laurent Gutmann |
2008-07-01 | - |
| 18390658 |
Insight from TonB hybrid proteins into the mechanism of iron transport through the outer membrane. J. Bacteriol. Wallace A Kaserer , Xiaoxu Jiang , Qiaobin Xiao , Daniel C Scott , Matthew Bauler , Daniel Copeland , Salete M C Newton , Phillip E Klebba |
2008-06-01 |
ldtC,
tonB
|
| 17369299 |
J. Bacteriol. Sophie Magnet , Samuel Bellais , Lionel Dubost , Martine Fourgeaud , Jean-Luc Mainardi , Sébastien Petit-Frère , Arul Marie , Dominique Mengin-Lecreulx , Michel Arthur , Laurent Gutmann |
2007-05-01 |
ldtA,
ldtB,
ldtC,
ldtE
|
| 17026754 |
BMC Microbiol. Everett T Hayes , Jessica C Wilks , Piero Sanfilippo , Elizabeth Yohannes , Daniel P Tate , Brian D Jones , Michael D Radmacher , Sandra S BonDurant , Joan L Slonczewski |
2006-01-01 |
nhaB,
hypF,
ygaZ,
ygaH,
dacC,
ldtC,
yagU,
mdtJ,
dacD,
lpxT,
mepA,
mdtI,
alx
|
| 16738553 |
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi |
2006-01-01 |
pmrR,
torI,
yaeP,
ykfH,
ykgO,
ylcG,
rzoD,
ybdZ,
cydX,
gnsA,
insA,
ymgF,
ymiA,
yciX,
rzoR,
ynfO,
yniD,
yobH,
yoeB,
yohO,
arnE,
ypeB,
ypfN,
ypjJ,
arfA,
yheV,
ysaB,
sgcB,
yjhX,
ytjA,
yibT,
yicS,
yidD,
yifL,
ghoT,
yjjZ,
mntS,
iroK,
wecF,
yigE,
blr,
yggP,
cpxP,
hdfR,
thiS,
greB,
rtcA,
smf,
ygcU,
ypjK,
hokE,
sslE,
glcF,
glcE,
yhaM,
tdcG,
ytfR,
hokB,
ldrD,
hokA,
ldrA,
ldrB,
ecnA,
ecnB,
yfjD,
yhdP,
yjjV,
cysW,
hokC,
ghxQ,
tatD,
yjdP,
cutC,
nirC,
frlC,
aroK,
gntU,
dgoD,
dgoA,
dgoR,
yigL,
ldrC,
ylbE,
ydbJ,
yeiW,
yehK,
yneM,
ykfM,
ylcI,
yciY,
yncL,
ylcH,
ynhF,
yciZ,
ydgU,
ypfM,
ymgI,
ymgJ,
dinQ
|
| 16397293 |
Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner |
2006-01-01 |
pmrR,
yfaS,
torI,
yaeP,
ykfH,
ykgO,
ylcG,
rzoD,
ybdZ,
cydX,
gnsA,
insA,
ymgF,
ymiA,
yciX,
rzoR,
ynfO,
yniD,
yobH,
yoeF,
yoeB,
yohO,
arnE,
ypdJ,
ypeB,
ypfN,
ypjJ,
arfA,
yheV,
ysaB,
sgcB,
yjhX,
ytjA,
yibT,
yicS,
yidD,
yifL,
ghoT,
yjjZ,
mntS,
iroK,
yifN,
wecF,
yigE,
blr,
yggP,
cpxP,
ygaY,
hdfR,
thiS,
yedN,
greB,
rtcA,
smf,
ygcU,
ypjK,
hokE,
sslE,
glcF,
glcE,
glvC,
yhaM,
tdcG,
ytfR,
yehH,
hokB,
ldrD,
hokA,
ldrA,
ldrB,
ecnA,
ecnB,
gapC,
yfjD,
yhdP,
yjjV,
cysW,
hokC,
ghxQ,
tatD,
yjdP,
cutC,
nirC,
frlC,
aroK,
gntU,
yedS,
dgoD,
dgoA,
dgoR,
yigL,
ldrC,
ylbE,
ydbJ,
yeiW,
yehK,
yaiX,
yoeA,
yneM
|
| 15773991 |
Transcriptional response of Escherichia coli to external copper. Mol. Microbiol. Kaneyoshi Yamamoto , Akira Ishihama |
2005-04-01 |
cpxP,
cusR,
tomB,
tesA,
cusF,
cusB,
cusA,
cueR,
moaB,
moaC,
moaD,
moaE,
ldtC,
yciW,
yncJ,
yccA,
dgcZ,
htpX,
copA,
spy,
cusC,
yedW,
yedV,
plaP,
puuC,
yqjA,
cueO,
cpxR,
cpxA,
aphA,
soxS,
mutL
|
| 15774872 |
J. Bacteriol. Monique Egler , Cornelia Grosse , Gregor Grass , Dietrich H Nies |
2005-04-01 |
bhsA,
ldtC,
ompC,
rpoE
|
| 15659689 |
Genome-wide transcriptional response of chemostat-cultured Escherichia coli to zinc. J. Bacteriol. Lucy J Lee , Jason A Barrett , Robert K Poole |
2005-02-01 | - |
| 排名 | 科研单位 | 文献 |
|---|---|---|
| {{affIndex+1}} |
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| 排名 | 研究人员 | 文献 |
|---|---|---|
| {{authorIndex+1}} |
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目前还没有研究热点人员