rplY - 50S ribosomal subunit protein L25-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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945618 rplY

基因描述

Type	Description
Definition	50S ribosomal subunit protein L25

研究结论

Date	Results	Publications
2016-10-29 11:01:00	The contact with protein L25 is important for the retention of protein L16 within the Escherichia coli ribosome in vivo.	26885579
2015-08-01 11:07:00	The rplY expression regulation represents one more example of regulatory pathways that control ribosome biogenesis in Escherichia coli and related bacteria.	25749694
2007-11-05 21:38:00	N-terminus verified by Edman degradation on complete protein	1093874,1100506,9298646,9868784

名称对应

Type	IDs
Synonymous	ECK2179
Gene	UniProtKB-ID: RL25_ECOLI UniprotKB: P68919 UniParc: UPI0000047CA3 EMBL: D13326, AP009048, U00008, U00096 EnsemblGenome: BAE76650, b2185 KO: eco:b2185, ecj:JW2173
Nucleutide sequences	EMBL-CDS: BAE76650.1, AAC75246.1, AAA16413.1, BAA02585.1 EnsemblGenome_TRS: AAC75246, BAE76650
Protein sequencees	EnsemblGenome_PRO: AAC75246, BAE76650 RefSeq: NP_416690.1
Others	UniRef100: UniRef100_A7ZP09 UniRef90: UniRef90_A7ZP09 UniRef50: UniRef50_A7ZP09

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mRNA

Protein

UniprotKB

Description

Refseq

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Location

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Pubmed编号	文献信息	发表日期	相关基因
27718375	Screen for genes involved in radiation survival of Escherichia coli and construction of a reference database. Mutat. Res. Neil J Sargentini , Nicholas P Gularte , Deborah A Hudman	2016-10-03	-
26885579	Role of Protein L25 and Its Contact with Protein L16 in Maintaining the Active State of Escherichia coli Ribosomes in vivo. Biochemistry Mosc. A Y Anikaev , A B Isaev , A V Korobeinikova , M B Garber , G M Gongadze	2016-01-01	-
25749694	Regulation of the rplY gene encoding 5S rRNA binding protein L25 in Escherichia coli and related bacteria. RNA Leonid V Aseev , Natalia S Bylinkina , Irina V Boni	2015-05-01	rplY
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
19913480	Regulation of the protein-conducting channel by a bound ribosome. Structure James Gumbart , Leonardo G Trabuco , Eduard Schreiner , Elizabeth Villa , Klaus Schulten	2009-11-11	rpsT, ftsQ, rplT, rpmA, rplY, rpmF, rpmG, rpmI, rpmB, rplS, rpsP, rpsU, rpsO, rplQ, rpsM, rpsK, rpsD, rpsE, rpmD, rplO, secY, rplE, rpsN, rpsH, rplF, rplR, rpmJ, rplP, rpmC, rpsQ, rplN, rplX, rpsS, rplV, rpsC, rpsJ, rplC, rplD, rplW, rplB, rplM, rpsL, rpsG, rpsB, rpmH, rpmE, rplA, rplK, secE, rplL, rplJ, rplI, rpsR, rpsF, rpsI, rplU
19696352	Structures of the ribosome in intermediate states of ratcheting. Science Wen Zhang , Jack A Dunkle , Jamie H D Cate	2009-08-21	-
18824089	Systems based mapping demonstrates that recovery from alkylation damage requires DNA repair, RNA processing, and translation associated networks. Genomics John P Rooney , Ajish D George , Ashish Patil , Ulrike Begley , Erin Bessette , Maria R Zappala , Xin Huang , Douglas S Conklin , Richard P Cunningham , Thomas J Begley	2009-01-01	blr, aroK, yaiT, dnaK, rpsT, ais, dcuC, cynR, clpX, tfaD, stfR, ahpC, ubiF, ybgK, ybhH, ybhR, gsiD, potH, ybjO, rplY, hflD, minC, oppD, ybgI, ydaS, ydaT, rzpD, ydeM, ydcS, ddpF, bdm, ddpA, uidR, rnt, slyA, ruvA, ruvB, ruvC, yecN, fliO, hisB, alkB, ada, mnmC, pdxH, yfdQ, cysA, yaiS, recO, recN, yciF, recA, recB, recC, smpB, prfB, alkA, argO, ycjR, yggL, parC, dnaG, rpsU, marA, pnp, deaD, rbfA, rpsO, glmM, fis, arcB, dam, gph, mtlA, pstB, atpF, mnmG, xerC, yihX, cpxA, tpiA, yiiS, priA, oxyR, rplA, mtn, cadC, epmA, hfq, ytfA, holC, dnaT, arcA, yjjY, cydD, symE, gmhA
18304323	Protein abundance profiling of the Escherichia coli cytosol. BMC Genomics Yasushi Ishihama , Thorsten Schmidt , Juri Rappsilber , Matthias Mann , F Ulrich Hartl , Michael J Kerner , Dmitrij Frishman	2008-01-01	-
17198710	Importance of the 5 S rRNA-binding ribosomal proteins for cell viability and translation in Escherichia coli. J. Mol. Biol. Alexey P Korepanov , George M Gongadze , Maria B Garber , Donald L Court , Mikhail G Bubunenko	2007-03-02	-
17187058	Absolute protein expression profiling estimates the relative contributions of transcriptional and translational regulation. Nat. Biotechnol. Peng Lu , Christine Vogel , Rong Wang , Xin Yao , Edward M Marcotte	2007-01-01	sspA, talB, dnaK, dnaJ, rpsT, ileS, dapB, carB, ftsZ, murE, aceF, acpP, surA, secA, can, aceE, panB, argF, lpxA, dksA, lpd, erpA, skp, dapD, acnB, tsf, glnH, fabZ, metQ, accA, galM, sodB, panC, pyrH, codA, opgG, pepD, tauB, eno, proC, phoR, thiI, gpmA, leuC, tig, clpP, clpX, lon, adk, htpG, acrB, trpD, apt, ydgH, rplT, purK, ompT, thrC, ybeD, ahpC, purR, glf, serA, miaB, pgm, seqA, rfbB, iscR, asnB, mprA, fldA, fur, sucA, sucB, hisJ, glnS, sucC, sucD, gltA, bioB, pheT, bioD, metK, sdhA, ybiC, tolB, ybiT, ldtB, moeA, gsiB, yliE, ihfA, serS, pflB, serC, aroA, ihfB, rpsA, mukE

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