| Type | Description |
|---|---|
| Definition | regulator of acid resistance, influenced by indole |
| Date | Results | Publications |
|---|---|---|
| 2010-01-21 00:00:00 | Data show that YmgB represses biofilm formation in rich medium containing glucose, decreases cellular motility, and protects the cell from acid indicating that YmgB has a major role in acid-resistance in E. coli. | 17765265 |
| 2010-01-21 00:00:00 | 5-FU inhibit biofilm formation through the global regulator, AriR. | 19172264 |
| Type | IDs |
|---|---|
| Synonymous | ECK1153, ymgB |
| Gene |
UniProtKB-ID:
ARIR_ECOLI
UniprotKB:
P75993
UniParc:
UPI000013B9C3
EMBL:
U00096,
AP009048
EnsemblGenome:
BAE76387,
b1166
KO:
eco:b1166,
ecj:JW1153
|
| Nucleutide sequences |
EMBL-CDS:
AAC74250.1,
BAE76387.1
EnsemblGenome_TRS:
BAE76387,
AAC74250
|
| Protein sequencees |
EnsemblGenome_PRO:
BAE76387,
AAC74250
RefSeq:
NP_415684.1
|
| Others |
UniRef100:
UniRef100_A7ZKT2
UniRef90:
UniRef90_A1AA91
UniRef50:
UniRef50_A1AA91
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
{{protein.nucleotideVersion}}
Ensembl: {{protein.nucleotideEnsembl}} |
{{protein.proteinVersion}}
Ensembl: {{protein.proteinEnsembl}} |
{{uniprot}} , |
Definition: {{{protein.definition}}}Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}} |
||||
| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
||||
暂无数据
| Pubmed编号 | 文献信息 | 发表日期 | 相关基因 |
|---|---|---|---|
| 24561554 |
The binary protein-protein interaction landscape of Escherichia coli. Nat. Biotechnol. Seesandra V Rajagopala , Patricia Sikorski , Ashwani Kumar , Roberto Mosca , James Vlasblom , Roland Arnold , Jonathan Franca-Koh , Suman B Pakala , Sadhna Phanse , Arnaud Ceol , Roman Häuser , Gabriella Siszler , Stefan Wuchty , Andrew Emili , Mohan Babu , Patrick Aloy , Rembert Pieper , Peter Uetz |
2014-03-01 | - |
| 19172264 |
Appl. Microbiol. Biotechnol. Can Attila , Akihiro Ueda , Thomas K Wood |
2009-03-01 |
ariR,
bluR
|
| 19240136 |
Genes Dev Natalia Tschowri , Susan Busse , Regine Hengge |
2009-02-15 | - |
| 18174134 |
Microbiology (Reading, Engl.) Christine A White-Ziegler , Suzin Um , Natalie M Pérez , Abby L Berns , Amy J Malhowski , Sarah Young |
2008-01-01 | - |
| 18302792 |
Rapid acid treatment of Escherichia coli: transcriptomic response and recovery. BMC Microbiol. Geetha Kannan , Jessica C Wilks , Devon M Fitzgerald , Brian D Jones , Sandra S Bondurant , Joan L Slonczewski |
2008-01-01 |
ymgC,
ariR,
ldtD,
yagU,
zinT,
ygaC,
sad,
ygiN,
yhcN,
yhjX,
yjeI,
fimB,
ymgA
|
| 17765265 |
J. Mol. Biol. Jintae Lee , Rebecca Page , Rodolfo GarcÃa-Contreras , Jeanne-Marie Palermino , Xue-Song Zhang , Ojus Doshi , Thomas K Wood , Wolfgang Peti |
2007-10-12 | - |
| 17222132 |
Temporal gene-expression in Escherichia coli K-12 biofilms. Environ. Microbiol. Joanna Domka , Jintae Lee , Tarun Bansal , Thomas K Wood |
2007-02-01 |
gatR,
cpxP,
yedN,
cysW,
ygaQ,
yfjI,
yaaW,
aceK,
ais,
ompX,
prpR,
tauD,
tauA,
ymgC,
tfaD,
ybcV,
stfR,
citC,
citA,
sucA,
sdhC,
ariR,
sdhA,
citD,
aspC,
hyaD,
hyaA,
hyaC,
cbdA,
bluR,
narG,
prpD,
ydeM,
adhP,
ydeQ,
eamA,
fumC,
glsA,
torC,
astC,
astE,
astD,
astA,
torT,
wcaD,
gatC,
gatB,
gatZ,
yafU,
ykfI,
cysU,
cysP,
hyfG,
grcA,
ypjF,
cysN,
cysH,
cysI,
cysJ,
hyfC,
kbaY,
agaC,
agaB,
acrS,
yhcA,
acrF,
gadE,
hdeD,
hdeB,
gadA,
gadW,
dctA,
gyrB,
phoU,
aceA,
frdA,
mpl,
iraD,
ymgA,
ykfA
|
| 17511876 |
Indole is an inter-species biofilm signal mediated by SdiA. BMC Microbiol. Jintae Lee , Arul Jayaraman , Thomas K Wood |
2007-01-01 |
ymgC,
ariR,
gadC,
gadB,
sdiA,
lpxT,
gadE,
hdeD,
hdeA,
hdeB,
gadA,
gadX,
ymgA
|
| 16397293 |
Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner |
2006-01-01 |
pmrR,
yfaS,
torI,
yaeP,
ykfH,
ykgO,
ylcG,
rzoD,
ybdZ,
cydX,
gnsA,
insA,
ymgF,
ymiA,
yciX,
rzoR,
ynfO,
yniD,
yobH,
yoeF,
yoeB,
yohO,
arnE,
ypdJ,
ypeB,
ypfN,
ypjJ,
arfA,
yheV,
ysaB,
sgcB,
yjhX,
ytjA,
yibT,
yicS,
yidD,
yifL,
ghoT,
yjjZ,
mntS,
iroK,
yifN,
wecF,
yigE,
blr,
yggP,
cpxP,
ygaY,
hdfR,
thiS,
yedN,
greB,
rtcA,
smf,
ygcU,
ypjK,
hokE,
sslE,
glcF,
glcE,
glvC,
yhaM,
tdcG,
ytfR,
yehH,
hokB,
ldrD,
hokA,
ldrA,
ldrB,
ecnA,
ecnB,
gapC,
yfjD,
yhdP,
yjjV,
cysW,
hokC,
ghxQ,
tatD,
yjdP,
cutC,
nirC,
frlC,
aroK,
gntU,
yedS,
dgoD,
dgoA,
dgoR,
yigL,
ldrC,
ylbE,
ydbJ,
yeiW,
yehK,
yaiX,
yoeA,
yneM
|
| 16385049 |
YdgG (TqsA) controls biofilm formation in Escherichia coli K-12 through autoinducer 2 transport. J. Bacteriol. Moshe Herzberg , Ian K Kaye , Wolfgang Peti , Thomas K Wood |
2006-01-01 |
ymgC,
ydgI,
ybfG,
ariR,
bioF,
yceO,
ycfT,
safA,
tqsA,
rlmI,
alpA,
yfjR,
ttdA,
srlQ,
yihR,
yjbG,
yjbH,
yjbF,
yjbE,
fumB,
yjiP,
yjhQ
|
| 排名 | 科研单位 | 文献 |
|---|---|---|
| {{affIndex+1}} |
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| 排名 | 研究人员 | 文献 |
|---|---|---|
| {{authorIndex+1}} |
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