nei - endonuclease VIII-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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945320 nei

基因描述

Type	Description
Definition	endonuclease VIII

研究结论

Date	Results	Publications
2021-02-06 13:50:00	Requirements for DNA bubble structure for efficient cleavage by helix-two-turn-helix DNA glycosylases.	31784740
2013-03-30 13:08:00	A study of conformational changes in the Nei molecule when the enzyme binds normal DNA, damaged but uncleavable DNA, and several cleavable damaged DNA substrates.	23000248
2010-01-21 00:00:00	crystal structure	15272182
2010-01-21 00:00:00	Nei base excision repair enzyme is critical for the recognition and repair of the spiroiminodihydantoin lesion in bacterial cell lines	16167829
2010-01-21 00:00:00	Endonuclease VIII does not protect E.coli against possible mutations attributable to formamidopyrimidine lesions.	15944451

名称对应

Type	IDs
Synonymous	ECK0703
Gene	UniProtKB-ID: END8_ECOLI UniprotKB: P50465 UniParc: UPI0000043B84 EMBL: D89754, U00096, U38616, AP009048 EnsemblGenome: BAA35378, b0714 KO: ecj:JW0704, eco:b0714
Nucleutide sequences	EMBL-CDS: AAC45355.1, BAA35378.1, AAC73808.1, BAA20414.1 EnsemblGenome_TRS: AAC73808, BAA35378
Protein sequencees	EnsemblGenome_PRO: AAC73808, BAA35378 RefSeq: NP_415242.1
Others	UniRef100: UniRef100_C4ZWI9 UniRef90: UniRef90_Q8X9C6 UniRef50: UniRef50_Q6D7H0

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mRNA

Protein

UniprotKB

Description

Refseq

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Location

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Pubmed编号	文献信息	发表日期	相关基因
31784740	Requirements for DNA bubble structure for efficient cleavage by helix-two-turn-helix DNA glycosylases. Mutagenesis Kristina A Makasheva , Anton V Endutkin , Dmitry O Zharkov	2020-02-13	-
23000248	Conformational dynamics of the interaction of Escherichia coli endonuclease VIII with DNA substrates. DNA Repair (Amst.) Nikita A Kuznetsov , Vladimir V Koval , Dmitry O Zharkov , Olga S Fedorova	2012-11-01	nei
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
19170771	Human Nei-like protein NEIL3 has AP lyase activity specific for single-stranded DNA and confers oxidative stress resistance in Escherichia coli mutant. Genes Cells Masashi Takao , Yoshitsugu Oohata , Kengo Kitadokoro , Kumiko Kobayashi , Shigenori Iwai , Akira Yasui , Shuji Yonei , Qiu-Mei Zhang	2009-02-01	-
17870674	Base excision repair enzyme endonuclease III suppresses mutagenesis caused by 8-hydroxy-dGTP. DNA Repair (Amst.) Tetsuya Suzuki , Kazuo Yamamoto , Hideyoshi Harashima , Hiroyuki Kamiya	2008-01-01	mutT, nei, nth, mutY
18029581	Base excision repair system suppresses mutagenesis caused by 8-hydroxy-dGTP in Escherichia coli. Nucleic Acids Symp Ser (Oxf) Tetsuya Suzuki , Kazuo Yamamoto , Hideyoshi Harashima , Hiroyuki Kamiya	2007-01-01	mutT, nei, nth, mutY
17002303	Catalytic mechanism of Escherichia coli endonuclease VIII: roles of the intercalation loop and the zinc finger. Biochemistry Konstantin Y Kropachev , Dmitry O Zharkov , Arthur P Grollman	2006-10-03	nei
16201966	Physical and functional interactions between Escherichia coli MutY and endonuclease VIII. Biochem. J. A-Lien Lu , Chih-Yung Lee , Lina Li , Xianghong Li	2006-01-01	nei, mutY
16738553	Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi	2006-01-01	pmrR, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeB, yohO, arnE, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, wecF, yigE, blr, yggP, cpxP, hdfR, thiS, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, yhaM, tdcG, ytfR, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yneM, ykfM, ylcI, yciY, yncL, ylcH, ynhF, yciZ, ydgU, ypfM, ymgI, ymgJ, dinQ
16397293	Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner	2006-01-01	pmrR, yfaS, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeF, yoeB, yohO, arnE, ypdJ, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, yifN, wecF, yigE, blr, yggP, cpxP, ygaY, hdfR, thiS, yedN, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, glvC, yhaM, tdcG, ytfR, yehH, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, gapC, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, yedS, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yaiX, yoeA, yneM

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