citC - citrate lyase synthetase-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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945231 citC

基因描述

Type	Description
Definition	citrate lyase synthetase

研究结论

Date	Results	Publications
2016-05-14 11:47:00	RNA sequencing revealed an open reading frame weakly transcribed in cow dung, coding for 101 residues and embedded completely in the -2 reading frame of citC in enterohemorrhagic E. coli O157:H7 str. EDL933; this gene is designated novel overlapping gene, nog1.	26677845

名称对应

Type	IDs
Synonymous	ECK0611, ybeO
Gene	UniProtKB-ID: CITC_ECOLI UniprotKB: P77390 UniParc: UPI0000127A3B EMBL: U00096, U46667, AP009048, U82598 EnsemblGenome: b0618, BAA35254 KO: eco:b0618, ecj:JW0610
Nucleutide sequences	EMBL-CDS: BAA35254.2, AAB40818.1, AAC73719.2, AAC28950.1 EnsemblGenome_TRS: AAC73719, BAA35254
Protein sequencees	EnsemblGenome_PRO: AAC73719, BAA35254 RefSeq: NP_415151.4
Others	UniRef100: UniRef100_P77390 UniRef90: UniRef90_P77390 UniRef50: UniRef50_P77390

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mRNA

Protein

UniprotKB

Description

Refseq

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Pubmed编号	文献信息	发表日期	相关基因
26677845	Evidence for the recent origin of a bacterial protein-coding, overlapping orphan gene by evolutionary overprinting. BMC Evol. Biol. Lea Fellner , Svenja Simon , Christian Scherling , Michael Witting , Steffen Schober , Christine Polte , Philippe Schmitt-Kopplin , Daniel A Keim , Siegfried Scherer , Klaus Neuhaus	2015-01-01	citC
24561554	The binary protein-protein interaction landscape of Escherichia coli. Nat. Biotechnol. Seesandra V Rajagopala , Patricia Sikorski , Ashwani Kumar , Roberto Mosca , James Vlasblom , Roland Arnold , Jonathan Franca-Koh , Suman B Pakala , Sadhna Phanse , Arnaud Ceol , Roman HÃ¤user , Gabriella Siszler , Stefan Wuchty , Andrew Emili , Mohan Babu , Patrick Aloy , Rembert Pieper , Peter Uetz	2014-03-01	-
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
18997424	Anaerobic regulation of citrate fermentation by CitAB in Escherichia coli. Biosci. Biotechnol. Biochem. Kaneyoshi Yamamoto , Fumika Matsumoto , Taku Oshima , Nobuyuki Fujita , Naotake Ogasawara , Akira Ishihama	2008-11-01	citC, citA, citB, exuT, mdh
17222132	Temporal gene-expression in Escherichia coli K-12 biofilms. Environ. Microbiol. Joanna Domka , Jintae Lee , Tarun Bansal , Thomas K Wood	2007-02-01	gatR, cpxP, yedN, cysW, ygaQ, yfjI, yaaW, aceK, ais, ompX, prpR, tauD, tauA, ymgC, tfaD, ybcV, stfR, citC, citA, sucA, sdhC, ariR, sdhA, citD, aspC, hyaD, hyaA, hyaC, cbdA, bluR, narG, prpD, ydeM, adhP, ydeQ, eamA, fumC, glsA, torC, astC, astE, astD, astA, torT, wcaD, gatC, gatB, gatZ, yafU, ykfI, cysU, cysP, hyfG, grcA, ypjF, cysN, cysH, cysI, cysJ, hyfC, kbaY, agaC, agaB, acrS, yhcA, acrF, gadE, hdeD, hdeB, gadA, gadW, dctA, gyrB, phoU, aceA, frdA, mpl, iraD, ymgA, ykfA
16397293	Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner	2006-01-01	pmrR, yfaS, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeF, yoeB, yohO, arnE, ypdJ, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, yifN, wecF, yigE, blr, yggP, cpxP, ygaY, hdfR, thiS, yedN, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, glvC, yhaM, tdcG, ytfR, yehH, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, gapC, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, yedS, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yaiX, yoeA, yneM
16738553	Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi	2006-01-01	pmrR, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeB, yohO, arnE, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, wecF, yigE, blr, yggP, cpxP, hdfR, thiS, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, yhaM, tdcG, ytfR, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yneM, ykfM, ylcI, yciY, yncL, ylcH, ynhF, yciZ, ydgU, ypfM, ymgI, ymgJ, dinQ
15308764	SOS response induction by beta-lactams and bacterial defense against antibiotic lethality. Science Christine Miller , Line Elnif Thomsen , Carina Gaggero , Ronen Mosseri , Hanne Ingmer , Stanley N Cohen	2004-09-10	ftsI, citF, citC, citA, citE, citD, citG, citB, citT, citX
9278503	The complete genome sequence of Escherichia coli K-12. Science F R Blattner , G Plunkett , C A Bloch , N T Perna , V Burland , M Riley , J Collado-Vides , J D Glasner , C K Rode , G F Mayhew , J Gregor , N W Davis , H A Kirkpatrick , M A Goeden , D J Rose , B Mau , Y Shao	1997-09-05	-
6354265	Purification and properties of citrate lyase from Escherichia coli. Biochemistry S Nilekani , C SivaRaman	1983-09-27	-

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