| Type | Description |
|---|---|
| Definition | DNA-binding transcriptional activator DecR |
| Date | Results | Publications |
|---|---|---|
| 2017-08-19 10:29:00 | The growth of mutants lacking either ybaO or its targets yhaOM was delayed in the presence of cysteine. | 27435271 |
| Type | IDs |
|---|---|
| Synonymous | ECK0441, cyuR, ybaO |
| Gene |
UniProtKB-ID:
DECR_ECOLI
UniprotKB:
P0ACJ5
UniParc:
UPI000013A2B9
EMBL:
D82943,
AP009048,
U00096,
L08627,
Z54355,
U82664
EnsemblGenome:
BAE76227,
b0447
KO:
eco:b0447,
ecj:JW0437
|
| Nucleutide sequences |
EMBL-CDS:
BAE76227.1,
AAB40203.1,
AAC73550.2,
BAA11651.1
EnsemblGenome_TRS:
BAE76227,
AAC73550
|
| Protein sequencees |
EnsemblGenome_PRO:
AAC73550,
BAE76227
RefSeq:
NP_414981.4
|
| Others |
UniRef100:
UniRef100_Q325F5
UniRef90:
UniRef90_Q325F5
UniRef50:
UniRef50_Q325F5
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
{{protein.nucleotideVersion}}
Ensembl: {{protein.nucleotideEnsembl}} |
{{protein.proteinVersion}}
Ensembl: {{protein.proteinEnsembl}} |
{{uniprot}} , |
Definition: {{{protein.definition}}}Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}} |
||||
| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
||||
暂无数据
| Pubmed编号 | 文献信息 | 发表日期 | 相关基因 |
|---|---|---|---|
| 27435271 |
Transcription factor DecR (YbaO) controls detoxification of L-cysteine in Escherichia coli. Microbiology (Reading, Engl.) Tomohiro Shimada , Kan Tanaka , Akira Ishihama |
2016-09-01 | - |
| 21873635 |
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas |
2011-09-01 | - |
| 16818608 |
Genes Dev Gen Nonaka , Matthew Blankschien , Christophe Herman , Carol A Gross , Virgil A Rhodius |
2006-07-01 | - |
| 16397293 |
Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner |
2006-01-01 |
pmrR,
yfaS,
torI,
yaeP,
ykfH,
ykgO,
ylcG,
rzoD,
ybdZ,
cydX,
gnsA,
insA,
ymgF,
ymiA,
yciX,
rzoR,
ynfO,
yniD,
yobH,
yoeF,
yoeB,
yohO,
arnE,
ypdJ,
ypeB,
ypfN,
ypjJ,
arfA,
yheV,
ysaB,
sgcB,
yjhX,
ytjA,
yibT,
yicS,
yidD,
yifL,
ghoT,
yjjZ,
mntS,
iroK,
yifN,
wecF,
yigE,
blr,
yggP,
cpxP,
ygaY,
hdfR,
thiS,
yedN,
greB,
rtcA,
smf,
ygcU,
ypjK,
hokE,
sslE,
glcF,
glcE,
glvC,
yhaM,
tdcG,
ytfR,
yehH,
hokB,
ldrD,
hokA,
ldrA,
ldrB,
ecnA,
ecnB,
gapC,
yfjD,
yhdP,
yjjV,
cysW,
hokC,
ghxQ,
tatD,
yjdP,
cutC,
nirC,
frlC,
aroK,
gntU,
yedS,
dgoD,
dgoA,
dgoR,
yigL,
ldrC,
ylbE,
ydbJ,
yeiW,
yehK,
yaiX,
yoeA,
yneM
|
| 16738553 |
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi |
2006-01-01 |
pmrR,
torI,
yaeP,
ykfH,
ykgO,
ylcG,
rzoD,
ybdZ,
cydX,
gnsA,
insA,
ymgF,
ymiA,
yciX,
rzoR,
ynfO,
yniD,
yobH,
yoeB,
yohO,
arnE,
ypeB,
ypfN,
ypjJ,
arfA,
yheV,
ysaB,
sgcB,
yjhX,
ytjA,
yibT,
yicS,
yidD,
yifL,
ghoT,
yjjZ,
mntS,
iroK,
wecF,
yigE,
blr,
yggP,
cpxP,
hdfR,
thiS,
greB,
rtcA,
smf,
ygcU,
ypjK,
hokE,
sslE,
glcF,
glcE,
yhaM,
tdcG,
ytfR,
hokB,
ldrD,
hokA,
ldrA,
ldrB,
ecnA,
ecnB,
yfjD,
yhdP,
yjjV,
cysW,
hokC,
ghxQ,
tatD,
yjdP,
cutC,
nirC,
frlC,
aroK,
gntU,
dgoD,
dgoA,
dgoR,
yigL,
ldrC,
ylbE,
ydbJ,
yeiW,
yehK,
yneM,
ykfM,
ylcI,
yciY,
yncL,
ylcH,
ynhF,
yciZ,
ydgU,
ypfM,
ymgI,
ymgJ,
dinQ
|
| 15556475 |
Phylogenetic distribution of DNA-binding transcription factors in bacteria and archaea. Comput Biol Chem Ernesto Pérez-Rueda , Julio Collado-Vides , Lorenzo Segovia |
2004-12-01 |
dgoR,
rhmR,
sfsA,
ybhD,
yjjJ,
ykgA,
ecpR,
yagI,
yaiW,
rutR,
ybaO,
ydiP,
ybcM,
ydhB,
ybdO,
ybeF,
yahB,
ogrK,
ybhN,
perR,
ybiH,
ybjJ,
rcdA,
pspC,
ycaN,
rclR,
mltD,
bluR,
mqsA,
marR,
yciT,
ycjW,
puuR,
racR,
pgrR,
ydeM,
ydcN,
hicB,
ydcR,
mcbR,
yneJ,
rspR,
cspB,
ynfL,
nemR,
ygeH,
ydjF,
dmlR,
cspC,
yebK,
yedW,
yeeY,
murR,
yeaM,
yegW,
yeiE,
sgcR,
ypdC,
yfeC,
yggD,
yfeD,
yfeR,
yaiV,
eutR,
yfhH,
glrR,
yfiE,
ygaV,
hycA,
ygbI,
yfjR,
ygeV,
yqeI,
ygeK,
ygeR,
ygfI,
ycfQ,
ydfK,
yqhC,
yafC,
ttdR,
yhaJ,
yghO,
aaeR,
yheO,
frlR,
ibaG,
dctR,
yhjC,
yhjB,
yiaU,
yidF,
yidL,
yidP,
yidZ,
yieP,
yihL,
yihW,
frvR
|
| 12675791 |
The Lrp family of transcriptional regulators. Mol. Microbiol. Arie B Brinkman , Thijs J G Ettema , Willem M de Vos , John van der Oost |
2003-04-01 | - |
| 10850996 |
Defining a rob regulon in Escherichia coli by using transposon mutagenesis. J Bacteriol M H Bennik , P J Pomposiello , D F Thorne , B Demple |
2000-07-01 | - |
| 10734204 |
The repertoire of DNA-binding transcriptional regulators in Escherichia coli K-12. Nucleic Acids Res. E Pérez-Rueda , J Collado-Vides |
2000-04-15 | - |
| 9278503 |
The complete genome sequence of Escherichia coli K-12. Science F R Blattner , G Plunkett , C A Bloch , N T Perna , V Burland , M Riley , J Collado-Vides , J D Glasner , C K Rode , G F Mayhew , J Gregor , N W Davis , H A Kirkpatrick , M A Goeden , D J Rose , B Mau , Y Shao |
1997-09-05 | - |
| 排名 | 科研单位 | 文献 |
|---|---|---|
| {{affIndex+1}} |
{{aff.value}} |
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| 排名 | 研究人员 | 文献 |
|---|---|---|
| {{authorIndex+1}} |
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