frmR - DNA-binding transcriptional repressor FrmR-BMKCloudï½ç¾è¿å®¢äº

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944986 frmR

基因描述

Type	Description
Definition	DNA-binding transcriptional repressor FrmR

研究结论

Date	Results	Publications
2018-07-07 11:56:00	The X-ray structure of the formaldehyde-treated Escherichia coli FrmR protein reveals the formation of methylene bridges that link adjacent Pro2 and Cys35 residues in the EcFrmR tetramer. Methylene bridge formation has profound effects on the surface charge pattern of EcFrmR and combined with biochemical/biophysical data suggests a mechanistic model for formaldehyde-sensing and derepression of frmRA(B) expression.	27934966

名称对应

Type	IDs
Synonymous	ECK0354, yaiN
Gene	UniProtKB-ID: FRMR_ECOLI UniprotKB: P0AAP3 UniParc: UPI000013A0D9 EMBL: U00096, AP009048, U73857, D85613 EnsemblGenome: b0357, BAE76139 KO: ecj:JW0348, eco:b0357
Nucleutide sequences	EMBL-CDS: AAB18082.1, AAC73460.2, BAE76139.1 EnsemblGenome_TRS: AAC73460, BAE76139
Protein sequencees	EnsemblGenome_PRO: AAC73460, BAE76139 RefSeq: NP_414891.4
Others	UniRef100: UniRef100_A7ZIA5 UniRef90: UniRef90_A7ZIA5 UniRef50: UniRef50_A7ZIA5

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mRNA

Protein

UniprotKB

Description

Refseq

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Pubmed编号	文献信息	发表日期	相关基因
27934966	The mechanism of a formaldehyde-sensing transcriptional regulator. Sci Rep Katie J Denby , Jeffrey Iwig , Claudine Bisson , Jodie Westwood , Matthew D Rolfe , Svetlana E Sedelnikova , Khadine Higgins , Michael J Maroney , Patrick J Baker , Peter T Chivers , Jeffrey Green	2016-12-09	-
16549663	The response of Escherichia coli to exposure to the biocide polyhexamethylene biguanide. Microbiology (Reading, Engl.) Michael J Allen , Graham F White , Andrew P Morby	2006-04-01	-
16738553	Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi	2006-01-01	pmrR, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeB, yohO, arnE, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, wecF, yigE, blr, yggP, cpxP, hdfR, thiS, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, yhaM, tdcG, ytfR, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yneM, ykfM, ylcI, yciY, yncL, ylcH, ynhF, yciZ, ydgU, ypfM, ymgI, ymgJ, dinQ
16397293	Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner	2006-01-01	pmrR, yfaS, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeF, yoeB, yohO, arnE, ypdJ, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, yifN, wecF, yigE, blr, yggP, cpxP, ygaY, hdfR, thiS, yedN, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, glvC, yhaM, tdcG, ytfR, yehH, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, gapC, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, yedS, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yaiX, yoeA, yneM
15466022	Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR. J. Bacteriol. Christopher D Herring , Frederick R Blattner	2004-10-01	frmR, frmA, frmB, alaX, alaW, relA, yhjR, bcsQ, ivbL, rbsC, rbsA, rbsD
11574054	A functional update of the Escherichia coli K-12 genome. Genome Biol. M H Serres , S Gopal , L A Nahum , P Liang , T Gaasterland , M Riley	2001-01-01	-
9278503	The complete genome sequence of Escherichia coli K-12. Science F R Blattner , G Plunkett , C A Bloch , N T Perna , V Burland , M Riley , J Collado-Vides , J D Glasner , C K Rode , G F Mayhew , J Gregor , N W Davis , H A Kirkpatrick , M A Goeden , D J Rose , B Mau , Y Shao	1997-09-05	-

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