hrpB - putative ATP-dependent RNA helicase HrpB-BMKCloudï½ç¾è¿å®¢äº

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944845 hrpB

基因描述

Type	Description
Definition	putative ATP-dependent RNA helicase HrpB

研究结论

Date	Results	Publications
2019-09-28 11:00:00	Results report the crystal structure of the DExH-box protein HrpB. A globular head is composed of dual RecA, winged-helix, helical bundle and oligonucleotide/oligosaccharide-binding domains. HrpB harbors a C-terminal region not found in proteins with known structure, which bestows the protein with unique interaction potential. HrpB binds RNA but not DNA, hydrolyzes all nucleoside triphosphates in an RNA-stimulated manner.	30174149
2019-03-30 13:03:00	analysis of the crystal structure of EcHrpB, which may function in helicase activity-independent RNA metabolic processes	30190128

名称对应

Type	IDs
Synonymous	ECK0147, yadO
Gene	UniProtKB-ID: HRPB_ECOLI UniprotKB: P37024 UniParc: UPI000012CBD1 EMBL: AP009048, D42122, U00096 EnsemblGenome: BAE76044, b0148 KO: eco:b0148, ecj:JW0144
Nucleutide sequences	EMBL-CDS: AAC73259.2, BAA21040.1, BAE76044.1 EnsemblGenome_TRS: BAE76044, AAC73259
Protein sequencees	EnsemblGenome_PRO: BAE76044, AAC73259 RefSeq: NP_414690.4
Others	UniRef100: UniRef100_P37024 UniRef90: UniRef90_P37024 UniRef50: UniRef50_P37024

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mRNA

Protein

UniprotKB

Description

Refseq

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Pubmed编号	文献信息	发表日期	相关基因
30174149	Crystal Structure of the Escherichia coli DExH-Box NTPase HrpB. Structure Agnieszka J Pietrzyk-Brzezinska , Eva Absmeier , Eberhard Klauck , Yanlin Wen , Haike Antelmann , Markus C Wahl	2018-11-06	-
30190128	Crystal structure of Escherichiaâcoli DEAH/RHA helicase HrpB. Biochem. Biophys. Res. Commun. Ben-Ge Xin , Wei-Fei Chen , Stephane Rety , Yang-Xue Dai , Xu-Guang Xi	2018-09-26	-
16606699	Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res Mohammad Arifuzzaman , Maki Maeda , Aya Itoh , Kensaku Nishikata , Chiharu Takita , Rintaro Saito , Takeshi Ara , Kenji Nakahigashi , Hsuan-Cheng Huang , Aki Hirai , Kohei Tsuzuki , Seira Nakamura , Mohammad Altaf-Ul-Amin , Taku Oshima , Tomoya Baba , Natsuko Yamamoto , Tomoyo Kawamura , Tomoko Ioka-Nakamichi , Masanari Kitagawa , Masaru Tomita , Shigehiko Kanaya , Chieko Wada , Hirotada Mori	2006-05-01	-
16738553	Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi	2006-01-01	pmrR, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeB, yohO, arnE, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, wecF, yigE, blr, yggP, cpxP, hdfR, thiS, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, yhaM, tdcG, ytfR, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yneM, ykfM, ylcI, yciY, yncL, ylcH, ynhF, yciZ, ydgU, ypfM, ymgI, ymgJ, dinQ
16397293	Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner	2006-01-01	pmrR, yfaS, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeF, yoeB, yohO, arnE, ypdJ, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, yifN, wecF, yigE, blr, yggP, cpxP, ygaY, hdfR, thiS, yedN, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, glvC, yhaM, tdcG, ytfR, yehH, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, gapC, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, yedS, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yaiX, yoeA, yneM
9278503	The complete genome sequence of Escherichia coli K-12. Science F R Blattner , G Plunkett , C A Bloch , N T Perna , V Burland , M Riley , J Collado-Vides , J D Glasner , C K Rode , G F Mayhew , J Gregor , N W Davis , H A Kirkpatrick , M A Goeden , D J Rose , B Mau , Y Shao	1997-09-05	-
7899078	Cloning and characterization of the hrpA gene in the terC region of Escherichia coli that is highly similar to the DEAH family RNA helicase genes of Saccharomyces cerevisiae. Nucleic Acids Res. H Moriya , H Kasai , K Isono	1995-02-25	-
8202364	Systematic sequencing of the Escherichia coli genome: analysis of the 2.4-4.1 min (110,917-193,643 bp) region. Nucleic Acids Res. N Fujita , H Mori , T Yura , A Ishihama	1994-05-11	-

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