oxdC - oxalate decarboxylase-BMKCloudï½ç¾è¿å®¢äº

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938620 oxdC

基因描述

Type	Description
Definition	oxalate decarboxylase

研究结论

Date	Results	Publications
2018-06-30 11:21:00	Collectively, this study advances the understanding of OxDC in resistance to rice disease and its possible mechanisms. The results also suggest that OxDC would be an effective antifungal protein preventing fungal infection in transgenic rice.	29223342
2017-06-03 11:58:00	The pH dependence of the Mn(III) electron paramagnetic resonance (EPR) signal compares very well with that of enzymatic activity, providing evidence that the catalytic reaction of oxalate decarboxylase is driven by Mn(III), which is generated in the presence of dioxygen.	27797181
2010-01-21 00:00:00	the reaction specificity of a catalytically active Mn center in OxDC can be perturbed by relatively small changes in local protein environment, in agreement with a proposal based on prior computational studies	17459326
2010-01-21 00:00:00	The flexibility and stability of oxdC active-site lid conformations are important in catalysis. The kinetics of four site- directed mutants are consistent with only site 1 being catalytically active.	17680775
2010-01-21 00:00:00	X-ray diffraction structure of oxalate decarboxylase	15583401

名称对应

Type	IDs
Synonymous	BSU33240
Gene	UniProtKB-ID: OXDC_BACSU, A0A6M3ZFZ5_BACSU UniprotKB: O34714, A0A6M3ZFZ5 UniParc: UPI0000060A4A EMBL: CP052842, AL009126, CP053102, AJ223978 EnsemblGenome: BSU33240 KO: bsu:BSU33240
Nucleutide sequences	EMBL-CDS: CAB15314.1, CAA11727.1, QJP90027.1, QJR47908.1 Gene_ORFName: HIR77_18730, HIR78_19250 EnsemblGenome_TRS: CAB15314
Protein sequencees	EnsemblGenome_PRO: CAB15314 RefSeq: NP_391204.1
Others	UniRef100: UniRef100_O34714 UniRef90: UniRef90_O34714 UniRef50: UniRef50_O34714

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mRNA

Protein

UniprotKB

Description

Refseq

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Pubmed编号	文献信息	发表日期	相关基因
29280348	Bacillus subtilis, the model Gram-positive bacterium: 20Â years of annotation refinement. Microb Biotechnol Rainer Borriss , Antoine Danchin , Colin R Harwood , Claudine MÃ©digue , Eduardo P C Rocha , Agnieszka Sekowska , David Vallenet	2018-01-01	-
29223342	Enhanced resistance to rice blast and sheath blight in rice (oryza sativa L.) by expressing the oxalate decarboxylase protein Bacisubin from Bacillus subtilis. Plant Sci Zhongqiang Qi , Junjie Yu , Lerong Shen , Zhenxian Yu , Mina Yu , Yan Du , Rongsheng Zhang , Tianqiao Song , Xiaole Yin , Yuxin Zhou , Huanhuan Li , Qian Wei , Yongfeng Liu	2017-12-01	-
27797181	Redox Cycling, pH Dependence, and Ligand Effects of Mn(III) in Oxalate Decarboxylase from Bacillus subtilis. Biochemistry Umar T Twahir , Andrew Ozarowski , Alexander Angerhofer	2016-11-29	-
23429746	An updated metabolic view of the Bacillus subtilis 168 genome. Microbiology (Reading, Engl.) Eugeni Belda , Agnieszka Sekowska , FranÃ§ois Le FÃ¨vre , Anne Morgat , Damien Mornico , Christos Ouzounis , David Vallenet , Claudine MÃ©digue , Antoine Danchin	2013-04-01	-
19383706	From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Microbiology (Reading) ValÃ©rie Barbe , StÃ©phane Cruveiller , Frank Kunst , Patricia Lenoble , Guillaume Meurice , Agnieszka Sekowska , David Vallenet , Tingzhang Wang , Ivan Moszer , Claudine MÃ©digue , Antoine Danchin	2009-06-01	-
17680775	The identity of the active site of oxalate decarboxylase and the importance of the stability of active-site lid conformations. Biochem. J. Victoria J Just , Matthew R Burrell , Laura Bowater , Iain McRobbie , Clare E M Stevenson , David M Lawson , Stephen Bornemann	2007-11-01	-
17459326	Investigating the roles of putative active site residues in the oxalate decarboxylase from Bacillus subtilis. Arch. Biochem. Biophys. Drazenka SvedruziÄ , Yong Liu , Laurie A Reinhardt , Ewa Wroclawska , W Wallace Cleland , Nigel G J Richards	2007-08-01	-
15583401	SAD at home: solving the structure of oxalate decarboxylase with the anomalous signal from manganese using X-ray data collected on a home source. Acta Crystallogr. D Biol. Crystallogr. Clare E M Stevenson , Adam Tanner , Laura Bowater , Stephen Bornemann , David M Lawson	2004-12-01	oxdC
9384377	The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Nature F Kunst , N Ogasawara , I Moszer , A M Albertini , G Alloni , V Azevedo , M G Bertero , P BessiÃ¨res , A Bolotin , S Borchert , R Borriss , L Boursier , A Brans , M Braun , S C Brignell , S Bron , S Brouillet , C V Bruschi , B Caldwell , V Capuano , N M Carter , S K Choi , J J Cordani , I F Connerton , N J Cummings , R A Daniel , F Denziot , K M Devine , A DÃ¼sterhÃ¶ft , S D Ehrlich , P T Emmerson , K D Entian , J Errington , C Fabret , E Ferrari , D Foulger , C Fritz , M Fujita , Y Fujita , S Fuma , A Galizzi , N Galleron , S Y Ghim , P Glaser , A Goffeau , E J Golightly , G Grandi , G Guiseppi , B J Guy , K Haga , J Haiech , C R Harwood , A HÃ¨naut , H Hilbert , S Holsappel , S Hosono , M F Hullo , M Itaya , L Jones , B Joris , D Karamata , Y Kasahara , M Klaerr-Blanchard , C Klein , Y Kobayashi , P Koetter , G Koningstein , S Krogh , M Kumano , K Kurita , A Lapidus , S Lardinois , J Lauber , V Lazarevic , S M Lee , A Levine , H Liu , S Masuda , C MauÃ«l , C MÃ©digue , N Medina , R P Mellado , M Mizuno , D Moestl , S Nakai , M Noback , D Noone , M O'Reilly , K Ogawa , A Ogiwara , B Oudega , S H Park , V Parro , T M Pohl , D Portelle , S Porwollik , A M Prescott , E Presecan , P Pujic , B Purnelle , G Rapoport , M Rey , S Reynolds , M Rieger , C Rivolta , E Rocha , B Roche , M Rose , Y Sadaie , T Sato , E Scanlan , S Schleich , R Schroeter , F Scoffone , J Sekiguchi , A Sekowska , S J Seror , P Serror , B S Shin , B Soldo , A Sorokin , E Tacconi , T Takagi , H Takahashi , K Takemaru , M Takeuchi , A Tamakoshi , T Tanaka , P Terpstra , A Togoni , V Tosato , S Uchiyama , M Vandebol , F Vannier , A Vassarotti , A Viari , R Wambutt , H Wedler , T Weitzenegger , P Winters , A Wipat , H Yamamoto , K Yamane , K Yasumoto , K Yata , K Yoshida , H F Yoshikawa , E Zumstein , H Yoshikawa , A Danchin	1997-11-20	yozQ, sspN, antE, mrpE, sboX, spsL, kipA, ygaF, sspG, ruvB, sda, sspK, yqzJ, yneP, ygzB, gerT, yojG, dgcW, sspL, ymzD, yezE, sspJ, yrzL, yizA, sspM, ydzU, ykzN, yqzK, yczK, yyzN, yoyI, youA, yezF, skfC, yjzI, rsoA, bsdD, ydzP, yxzL, yczO, yrzR, ykzL, yizB, yyzM, ykzW, ypzJ, yozS, ynzL, ygzC, ybzH, ykzS, yoyG, ytzI, yfzA, yojW, ypzF, epsK, yuzM, yuzL, yqzO, yszA, yczN, yyzH, yrzQ, ydzK, ypzH, yozT, yozV, ykzT, yizD, yoyC, yokU, mstX, yngHB, ylzI, ywzH, yoyF, spoVAEB, ynzK, spoVAEA, yhzD, yjzJ, yvzG, ytzJ, ydzQ, ykzU, fadG, yrzO, ylzH, yczL, yuzJ, ykzP, ypzI, ypzG, yuzI, yozY, yezG, ytrH, yozX

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